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Physics behind the Barrier to Internal Rotation of an Acetyl Chloride Molecule: A Combined Approach from Density Functional Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved Wavelet Transform Theory
[Image: see text] The physics behind the barriers to internal rotation of acetyl chloride (AC) molecule has been reported. The AC molecule closely resembles the molecular structure of acetaldehyde; the only subtle difference is the presence of a heavy chlorine atom in place of the hydrogen atom of t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6644580/ https://www.ncbi.nlm.nih.gov/pubmed/31458850 http://dx.doi.org/10.1021/acsomega.8b00316 |
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author | Dutta, Bipan Bhattacharjee, Biplab Chowdhury, Joydeep |
author_facet | Dutta, Bipan Bhattacharjee, Biplab Chowdhury, Joydeep |
author_sort | Dutta, Bipan |
collection | PubMed |
description | [Image: see text] The physics behind the barriers to internal rotation of acetyl chloride (AC) molecule has been reported. The AC molecule closely resembles the molecular structure of acetaldehyde; the only subtle difference is the presence of a heavy chlorine atom in place of the hydrogen atom of the aldehyde group for the latter. This paper aims to study the effect of substitution of the heavy chlorine atom on the barrier energetics of the AC molecule. The reason behind the barrier for the AC molecule has been estimated for the first time from the unified approach using barrier energetics, natural bond orbital, nuclear virial, and relaxation analyses using density functional theory, Car–Parrinello molecular dynamics, and wavelet transform theory. Complete analyses reveal the concomitant relaxations of both the in-plane C(methyl)–C(1) and C(methyl)–H(4) bonds toward understanding the origin of the barrier due to internal rotation for the AC molecule. The large negative value of “V(6)” further suggests that both the abovementioned degrees of freedom are coupled with the −CH(3) torsional vibration of the molecule. The coupling matrix (H(12)) element has also been estimated. Time-resolved band stretching frequencies of C(methyl)–C(1) and C(1)–Cl(3) bonds of the AC molecule, as obtained from wavelet transformation analysis, primarily preclude the possibility of coupling between the C(1)–Cl(3) bond and the torsional motion associated with the methyl group of the molecule. |
format | Online Article Text |
id | pubmed-6644580 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-66445802019-08-27 Physics behind the Barrier to Internal Rotation of an Acetyl Chloride Molecule: A Combined Approach from Density Functional Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved Wavelet Transform Theory Dutta, Bipan Bhattacharjee, Biplab Chowdhury, Joydeep ACS Omega [Image: see text] The physics behind the barriers to internal rotation of acetyl chloride (AC) molecule has been reported. The AC molecule closely resembles the molecular structure of acetaldehyde; the only subtle difference is the presence of a heavy chlorine atom in place of the hydrogen atom of the aldehyde group for the latter. This paper aims to study the effect of substitution of the heavy chlorine atom on the barrier energetics of the AC molecule. The reason behind the barrier for the AC molecule has been estimated for the first time from the unified approach using barrier energetics, natural bond orbital, nuclear virial, and relaxation analyses using density functional theory, Car–Parrinello molecular dynamics, and wavelet transform theory. Complete analyses reveal the concomitant relaxations of both the in-plane C(methyl)–C(1) and C(methyl)–H(4) bonds toward understanding the origin of the barrier due to internal rotation for the AC molecule. The large negative value of “V(6)” further suggests that both the abovementioned degrees of freedom are coupled with the −CH(3) torsional vibration of the molecule. The coupling matrix (H(12)) element has also been estimated. Time-resolved band stretching frequencies of C(methyl)–C(1) and C(1)–Cl(3) bonds of the AC molecule, as obtained from wavelet transformation analysis, primarily preclude the possibility of coupling between the C(1)–Cl(3) bond and the torsional motion associated with the methyl group of the molecule. American Chemical Society 2018-06-22 /pmc/articles/PMC6644580/ /pubmed/31458850 http://dx.doi.org/10.1021/acsomega.8b00316 Text en Copyright © 2018 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Dutta, Bipan Bhattacharjee, Biplab Chowdhury, Joydeep Physics behind the Barrier to Internal Rotation of an Acetyl Chloride Molecule: A Combined Approach from Density Functional Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved Wavelet Transform Theory |
title | Physics behind the Barrier to Internal Rotation of
an Acetyl Chloride Molecule: A Combined Approach from Density Functional
Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved
Wavelet Transform Theory |
title_full | Physics behind the Barrier to Internal Rotation of
an Acetyl Chloride Molecule: A Combined Approach from Density Functional
Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved
Wavelet Transform Theory |
title_fullStr | Physics behind the Barrier to Internal Rotation of
an Acetyl Chloride Molecule: A Combined Approach from Density Functional
Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved
Wavelet Transform Theory |
title_full_unstemmed | Physics behind the Barrier to Internal Rotation of
an Acetyl Chloride Molecule: A Combined Approach from Density Functional
Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved
Wavelet Transform Theory |
title_short | Physics behind the Barrier to Internal Rotation of
an Acetyl Chloride Molecule: A Combined Approach from Density Functional
Theory, Car–Parrinello Molecular Dynamics, and Time-Resolved
Wavelet Transform Theory |
title_sort | physics behind the barrier to internal rotation of
an acetyl chloride molecule: a combined approach from density functional
theory, car–parrinello molecular dynamics, and time-resolved
wavelet transform theory |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6644580/ https://www.ncbi.nlm.nih.gov/pubmed/31458850 http://dx.doi.org/10.1021/acsomega.8b00316 |
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