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The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method

In this research, we exploit an image-based deep learning framework to distinguish three major subtypes of renal cell carcinoma (clear cell, papillary, and chromophobe) using images acquired with computed tomography (CT). A biopsy-proven benchmarking dataset was built from 169 renal cancer cases. In...

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Detalles Bibliográficos
Autores principales: Han, Seokmin, Hwang, Sung Il, Lee, Hak Jong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6646616/
https://www.ncbi.nlm.nih.gov/pubmed/31098732
http://dx.doi.org/10.1007/s10278-019-00230-2
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author Han, Seokmin
Hwang, Sung Il
Lee, Hak Jong
author_facet Han, Seokmin
Hwang, Sung Il
Lee, Hak Jong
author_sort Han, Seokmin
collection PubMed
description In this research, we exploit an image-based deep learning framework to distinguish three major subtypes of renal cell carcinoma (clear cell, papillary, and chromophobe) using images acquired with computed tomography (CT). A biopsy-proven benchmarking dataset was built from 169 renal cancer cases. In each case, images were acquired at three phases(phase 1, before injection of the contrast agent; phase 2, 1 min after the injection; phase 3, 5 min after the injection). After image acquisition, rectangular ROI (region of interest) in each phase image was marked by radiologists. After cropping the ROIs, a combination weight was multiplied to the three-phase ROI images and the linearly combined images were fed into a deep learning neural network after concatenation. A deep learning neural network was trained to classify the subtypes of renal cell carcinoma, using the drawn ROIs as inputs and the biopsy results as labels. The network showed about 0.85 accuracy, 0.64–0.98 sensitivity, 0.83–0.93 specificity, and 0.9 AUC. The proposed framework which is based on deep learning method and ROIs provided by radiologists showed promising results in renal cell subtype classification. We hope it will help future research on this subject and it can cooperate with radiologists in classifying the subtype of lesion in real clinical situation.
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spelling pubmed-66466162019-08-06 The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method Han, Seokmin Hwang, Sung Il Lee, Hak Jong J Digit Imaging Article In this research, we exploit an image-based deep learning framework to distinguish three major subtypes of renal cell carcinoma (clear cell, papillary, and chromophobe) using images acquired with computed tomography (CT). A biopsy-proven benchmarking dataset was built from 169 renal cancer cases. In each case, images were acquired at three phases(phase 1, before injection of the contrast agent; phase 2, 1 min after the injection; phase 3, 5 min after the injection). After image acquisition, rectangular ROI (region of interest) in each phase image was marked by radiologists. After cropping the ROIs, a combination weight was multiplied to the three-phase ROI images and the linearly combined images were fed into a deep learning neural network after concatenation. A deep learning neural network was trained to classify the subtypes of renal cell carcinoma, using the drawn ROIs as inputs and the biopsy results as labels. The network showed about 0.85 accuracy, 0.64–0.98 sensitivity, 0.83–0.93 specificity, and 0.9 AUC. The proposed framework which is based on deep learning method and ROIs provided by radiologists showed promising results in renal cell subtype classification. We hope it will help future research on this subject and it can cooperate with radiologists in classifying the subtype of lesion in real clinical situation. Springer International Publishing 2019-05-16 2019-08 /pmc/articles/PMC6646616/ /pubmed/31098732 http://dx.doi.org/10.1007/s10278-019-00230-2 Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Han, Seokmin
Hwang, Sung Il
Lee, Hak Jong
The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title_full The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title_fullStr The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title_full_unstemmed The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title_short The Classification of Renal Cancer in 3-Phase CT Images Using a Deep Learning Method
title_sort classification of renal cancer in 3-phase ct images using a deep learning method
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6646616/
https://www.ncbi.nlm.nih.gov/pubmed/31098732
http://dx.doi.org/10.1007/s10278-019-00230-2
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