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Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance

[Image: see text] The role of the main dihedral angles in the electronic circular dichroism (ECD) spectra of poly(phenylacetylene)s (PPAs) was estimated by using time-dependent density functional theory (TD-DFT) for oligo(phenylacetylene)s (n = 12). These studies reveal that in cis–transoidal arrang...

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Autores principales: Fernández, Berta, Rodríguez, Rafael, Quiñoá, Emilio, Riguera, Ricardo, Freire, Félix
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2019
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6648364/
https://www.ncbi.nlm.nih.gov/pubmed/31459695
http://dx.doi.org/10.1021/acsomega.9b00122
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author Fernández, Berta
Rodríguez, Rafael
Quiñoá, Emilio
Riguera, Ricardo
Freire, Félix
author_facet Fernández, Berta
Rodríguez, Rafael
Quiñoá, Emilio
Riguera, Ricardo
Freire, Félix
author_sort Fernández, Berta
collection PubMed
description [Image: see text] The role of the main dihedral angles in the electronic circular dichroism (ECD) spectra of poly(phenylacetylene)s (PPAs) was estimated by using time-dependent density functional theory (TD-DFT) for oligo(phenylacetylene)s (n = 12). These studies reveal that in cis–transoidal arrangements, the first Cotton effect is dominated by excitations involving molecular orbitals (MOs) mainly related to the polyene backbone. Hence, for this scaffold, the ± sign of the first Cotton effect reflects the P/M helical sense of the internal helix of the polymer. However, in cis–cisoidal arrangements, contribution of MOs in the polyene and the aryl rings of the PPA backbone produce the first Cotton effect band. As a result, two different ECD signatures with three or four alternating Cotton effects can be produced depending on the sign of the ω(1) and ω(3) dihedral angles which determine the helical sense of the polyene (ω(1)) and the relative orientation of the aryl ring toward the polyene (ω(3)), respectively. Thus, on the one hand, if ω(1) and ω(3) rotate in opposite directions, a CD with three alternating Cotton effects is observed, where the sign of first Cotton correlates with the P/M helical sense of the polyene. On the other hand, if ω(1) and ω(3) rotate in the same direction, a CD signature with four alternating Cotton effects is produced where the information relative to the P/M helical sense of the polyene is contained in the second Cotton effect.
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spelling pubmed-66483642019-08-27 Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance Fernández, Berta Rodríguez, Rafael Quiñoá, Emilio Riguera, Ricardo Freire, Félix ACS Omega [Image: see text] The role of the main dihedral angles in the electronic circular dichroism (ECD) spectra of poly(phenylacetylene)s (PPAs) was estimated by using time-dependent density functional theory (TD-DFT) for oligo(phenylacetylene)s (n = 12). These studies reveal that in cis–transoidal arrangements, the first Cotton effect is dominated by excitations involving molecular orbitals (MOs) mainly related to the polyene backbone. Hence, for this scaffold, the ± sign of the first Cotton effect reflects the P/M helical sense of the internal helix of the polymer. However, in cis–cisoidal arrangements, contribution of MOs in the polyene and the aryl rings of the PPA backbone produce the first Cotton effect band. As a result, two different ECD signatures with three or four alternating Cotton effects can be produced depending on the sign of the ω(1) and ω(3) dihedral angles which determine the helical sense of the polyene (ω(1)) and the relative orientation of the aryl ring toward the polyene (ω(3)), respectively. Thus, on the one hand, if ω(1) and ω(3) rotate in opposite directions, a CD with three alternating Cotton effects is observed, where the sign of first Cotton correlates with the P/M helical sense of the polyene. On the other hand, if ω(1) and ω(3) rotate in the same direction, a CD signature with four alternating Cotton effects is produced where the information relative to the P/M helical sense of the polyene is contained in the second Cotton effect. American Chemical Society 2019-03-13 /pmc/articles/PMC6648364/ /pubmed/31459695 http://dx.doi.org/10.1021/acsomega.9b00122 Text en Copyright © 2019 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Fernández, Berta
Rodríguez, Rafael
Quiñoá, Emilio
Riguera, Ricardo
Freire, Félix
Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title_full Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title_fullStr Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title_full_unstemmed Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title_short Decoding the ECD Spectra of Poly(phenylacetylene)s: Structural Significance
title_sort decoding the ecd spectra of poly(phenylacetylene)s: structural significance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6648364/
https://www.ncbi.nlm.nih.gov/pubmed/31459695
http://dx.doi.org/10.1021/acsomega.9b00122
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