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Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method

Remote sensing (RS) is currently regarded as one of the standard tools used for mapping invasive and expansive plants for scientific purposes and it is increasingly widely used in nature conservation management. The applicability of RS methods is determined by its limitations and requirements. One o...

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Autores principales: Kopeć, Dominik, Zakrzewska, Agata, Halladin-Dąbrowska, Anna, Wylazłowska, Justyna, Kania, Adam, Niedzielko, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6651360/
https://www.ncbi.nlm.nih.gov/pubmed/31261669
http://dx.doi.org/10.3390/s19132871
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author Kopeć, Dominik
Zakrzewska, Agata
Halladin-Dąbrowska, Anna
Wylazłowska, Justyna
Kania, Adam
Niedzielko, Jan
author_facet Kopeć, Dominik
Zakrzewska, Agata
Halladin-Dąbrowska, Anna
Wylazłowska, Justyna
Kania, Adam
Niedzielko, Jan
author_sort Kopeć, Dominik
collection PubMed
description Remote sensing (RS) is currently regarded as one of the standard tools used for mapping invasive and expansive plants for scientific purposes and it is increasingly widely used in nature conservation management. The applicability of RS methods is determined by its limitations and requirements. One of the most important limitations is the species percentage cover at which the classification result is correct and useful for nature conservation. The primary objective, carried out in 2017 in three areas of Poland, was to determine the minimum percentage cover from which it is possible to identify a target species by RS methods. A secondary objective of this research, related to the requirements of the method, was to optimize the set of training polygons for a target species in terms of the number of polygons and abundance percentage cover of the target species. Our method has to be easy to use, effective, and applicable, therefore the analysis was carried out using the basic set of rasters—the first 30 channels after the Minimum Noise Fraction (MNF) transformation (the mosaic of hyperspectral data from HySpex sensors with spectral range 0.4–2.5 µm) and commonly used Random Forest algorithm. The analysis used airborne hyperspectral data with a spatial resolution of 1 m to perform classification of one invasive and three expansive plants—two grasses and two large perennials. On-ground training and validation data sets were collected simultaneously with airborne data collection. When testing different classification scenarios, only the set of training polygons for a target species was changed. Classification results were evaluated based on three methods: accuracy measures (Kappa and F1), true-positive pixels in subclasses with different species cover and compatibility with field mapping. The classification results indicate that to classify the target plant species at the accepted level, the training dataset should contain polygons with a species cover ranging from 80–100%. Training performed only using polygons with a species characterized by a variable, but lower, cover (20–70%) and missing samples in the 80–100% range, led to a map which was not acceptable because of a high overestimation of target species. We achieved effective identification of species in areas where the species cover is above 50%, considering that ecosystems are heterogeneous. The results of these studies developed a methodology of field data acquisition and the necessity of synchronization in the acquisition of airborne data, and training and validation of on-ground sampling.
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spelling pubmed-66513602019-08-08 Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method Kopeć, Dominik Zakrzewska, Agata Halladin-Dąbrowska, Anna Wylazłowska, Justyna Kania, Adam Niedzielko, Jan Sensors (Basel) Article Remote sensing (RS) is currently regarded as one of the standard tools used for mapping invasive and expansive plants for scientific purposes and it is increasingly widely used in nature conservation management. The applicability of RS methods is determined by its limitations and requirements. One of the most important limitations is the species percentage cover at which the classification result is correct and useful for nature conservation. The primary objective, carried out in 2017 in three areas of Poland, was to determine the minimum percentage cover from which it is possible to identify a target species by RS methods. A secondary objective of this research, related to the requirements of the method, was to optimize the set of training polygons for a target species in terms of the number of polygons and abundance percentage cover of the target species. Our method has to be easy to use, effective, and applicable, therefore the analysis was carried out using the basic set of rasters—the first 30 channels after the Minimum Noise Fraction (MNF) transformation (the mosaic of hyperspectral data from HySpex sensors with spectral range 0.4–2.5 µm) and commonly used Random Forest algorithm. The analysis used airborne hyperspectral data with a spatial resolution of 1 m to perform classification of one invasive and three expansive plants—two grasses and two large perennials. On-ground training and validation data sets were collected simultaneously with airborne data collection. When testing different classification scenarios, only the set of training polygons for a target species was changed. Classification results were evaluated based on three methods: accuracy measures (Kappa and F1), true-positive pixels in subclasses with different species cover and compatibility with field mapping. The classification results indicate that to classify the target plant species at the accepted level, the training dataset should contain polygons with a species cover ranging from 80–100%. Training performed only using polygons with a species characterized by a variable, but lower, cover (20–70%) and missing samples in the 80–100% range, led to a map which was not acceptable because of a high overestimation of target species. We achieved effective identification of species in areas where the species cover is above 50%, considering that ecosystems are heterogeneous. The results of these studies developed a methodology of field data acquisition and the necessity of synchronization in the acquisition of airborne data, and training and validation of on-ground sampling. MDPI 2019-06-28 /pmc/articles/PMC6651360/ /pubmed/31261669 http://dx.doi.org/10.3390/s19132871 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kopeć, Dominik
Zakrzewska, Agata
Halladin-Dąbrowska, Anna
Wylazłowska, Justyna
Kania, Adam
Niedzielko, Jan
Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title_full Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title_fullStr Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title_full_unstemmed Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title_short Using Airborne Hyperspectral Imaging Spectroscopy to Accurately Monitor Invasive and Expansive Herb Plants: Limitations and Requirements of the Method
title_sort using airborne hyperspectral imaging spectroscopy to accurately monitor invasive and expansive herb plants: limitations and requirements of the method
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6651360/
https://www.ncbi.nlm.nih.gov/pubmed/31261669
http://dx.doi.org/10.3390/s19132871
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