Cargando…

The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation

Open research, data sharing and data re-use have become a priority for publicly- and charity-funded research. Efficient data management naturally requires computational resources that assist in data description, preservation and discovery. While it is possible to fund development of data management...

Descripción completa

Detalles Bibliográficos
Autores principales: Zielinski, Tomasz, Hay, Johnny, Millar, Andrew J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6652102/
https://www.ncbi.nlm.nih.gov/pubmed/31363499
http://dx.doi.org/10.12688/wellcomeopenres.15341.2
_version_ 1783438499108618240
author Zielinski, Tomasz
Hay, Johnny
Millar, Andrew J.
author_facet Zielinski, Tomasz
Hay, Johnny
Millar, Andrew J.
author_sort Zielinski, Tomasz
collection PubMed
description Open research, data sharing and data re-use have become a priority for publicly- and charity-funded research. Efficient data management naturally requires computational resources that assist in data description, preservation and discovery. While it is possible to fund development of data management systems, currently it is more difficult to sustain data resources beyond the original grants. That puts the safety of the data at risk and undermines the very purpose of data gathering. PlaSMo stands for ‘Plant Systems-biology Modelling’ and the PlaSMo model repository was envisioned by the plant systems biology community in 2005 with the initial funding lasting until 2010. We addressed the sustainability of the PlaSMo repository and assured preservation of these data by implementing an exit strategy. For our exit strategy we migrated data to an alternative, public repository with secured funding. We describe details of our decision process and aspects of the implementation. Our experience may serve as an example for other projects in a similar situation. We share our reflections on the sustainability of biological data management and the future outcomes of its funding. We expect it to be a useful input for funding bodies.
format Online
Article
Text
id pubmed-6652102
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher F1000 Research Limited
record_format MEDLINE/PubMed
spelling pubmed-66521022019-07-29 The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation Zielinski, Tomasz Hay, Johnny Millar, Andrew J. Wellcome Open Res Research Note Open research, data sharing and data re-use have become a priority for publicly- and charity-funded research. Efficient data management naturally requires computational resources that assist in data description, preservation and discovery. While it is possible to fund development of data management systems, currently it is more difficult to sustain data resources beyond the original grants. That puts the safety of the data at risk and undermines the very purpose of data gathering. PlaSMo stands for ‘Plant Systems-biology Modelling’ and the PlaSMo model repository was envisioned by the plant systems biology community in 2005 with the initial funding lasting until 2010. We addressed the sustainability of the PlaSMo repository and assured preservation of these data by implementing an exit strategy. For our exit strategy we migrated data to an alternative, public repository with secured funding. We describe details of our decision process and aspects of the implementation. Our experience may serve as an example for other projects in a similar situation. We share our reflections on the sustainability of biological data management and the future outcomes of its funding. We expect it to be a useful input for funding bodies. F1000 Research Limited 2019-09-23 /pmc/articles/PMC6652102/ /pubmed/31363499 http://dx.doi.org/10.12688/wellcomeopenres.15341.2 Text en Copyright: © 2019 Zielinski T et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Note
Zielinski, Tomasz
Hay, Johnny
Millar, Andrew J.
The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title_full The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title_fullStr The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title_full_unstemmed The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title_short The grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
title_sort grant is dead, long live the data - migration as a pragmatic exit strategy for research data preservation
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6652102/
https://www.ncbi.nlm.nih.gov/pubmed/31363499
http://dx.doi.org/10.12688/wellcomeopenres.15341.2
work_keys_str_mv AT zielinskitomasz thegrantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation
AT hayjohnny thegrantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation
AT millarandrewj thegrantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation
AT zielinskitomasz grantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation
AT hayjohnny grantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation
AT millarandrewj grantisdeadlonglivethedatamigrationasapragmaticexitstrategyforresearchdatapreservation