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Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017

The Washington State Department of Health Public Health Laboratories (WAPHL) has tested 11,501 samples between 2007 and 2017 for a foodborne disease using a combination of identification, serotyping, and subtyping tools. During this period there were 8037 total clinical and environmental samples tes...

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Autores principales: Swoveland, Jennifer L., Stewart, Laurie K., Eckmann, Mary Kaye, Gee, Raymond, Allen, Krisandra J., Vandegrift, Calley M., Olson, Gina, Kang, Mi-Gyeong, Tran, Michael L., Melius, Elizabeth, Hiatt, Brian, Gautom, Romesh K., Perez-Osorio, Ailyn C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mary Ann Liebert, Inc., publishers 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6653799/
https://www.ncbi.nlm.nih.gov/pubmed/30969140
http://dx.doi.org/10.1089/fpd.2018.2592
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author Swoveland, Jennifer L.
Stewart, Laurie K.
Eckmann, Mary Kaye
Gee, Raymond
Allen, Krisandra J.
Vandegrift, Calley M.
Olson, Gina
Kang, Mi-Gyeong
Tran, Michael L.
Melius, Elizabeth
Hiatt, Brian
Gautom, Romesh K.
Perez-Osorio, Ailyn C.
author_facet Swoveland, Jennifer L.
Stewart, Laurie K.
Eckmann, Mary Kaye
Gee, Raymond
Allen, Krisandra J.
Vandegrift, Calley M.
Olson, Gina
Kang, Mi-Gyeong
Tran, Michael L.
Melius, Elizabeth
Hiatt, Brian
Gautom, Romesh K.
Perez-Osorio, Ailyn C.
author_sort Swoveland, Jennifer L.
collection PubMed
description The Washington State Department of Health Public Health Laboratories (WAPHL) has tested 11,501 samples between 2007 and 2017 for a foodborne disease using a combination of identification, serotyping, and subtyping tools. During this period there were 8037 total clinical and environmental samples tested by pulsed-field gel electrophoresis (PFGE), including 512 foodborne disease clusters and 2176 PFGE patterns of Salmonella enterica subsp. enterica. There were 2446 Shiga toxin–producing Escherichia coli samples tested by PFGE, which included 158 foodborne disease clusters and 1174 PFGE patterns. There were 332 samples of Listeria monocytogenes tested by PFGE, including 35 foodborne disease clusters and 104 PFGE patterns. Sources linked to outbreaks included raw chicken, unpasteurized dairy products, various produce types, and undercooked beef among others. As next-generation sequencing (NGS) replaces PFGE, the impact of this transition is expected to be significant given the enhanced cluster detection power NGS brings. The measures presented here will be a reference baseline in future years.
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spelling pubmed-66537992019-07-25 Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017 Swoveland, Jennifer L. Stewart, Laurie K. Eckmann, Mary Kaye Gee, Raymond Allen, Krisandra J. Vandegrift, Calley M. Olson, Gina Kang, Mi-Gyeong Tran, Michael L. Melius, Elizabeth Hiatt, Brian Gautom, Romesh K. Perez-Osorio, Ailyn C. Foodborne Pathog Dis Original Articles The Washington State Department of Health Public Health Laboratories (WAPHL) has tested 11,501 samples between 2007 and 2017 for a foodborne disease using a combination of identification, serotyping, and subtyping tools. During this period there were 8037 total clinical and environmental samples tested by pulsed-field gel electrophoresis (PFGE), including 512 foodborne disease clusters and 2176 PFGE patterns of Salmonella enterica subsp. enterica. There were 2446 Shiga toxin–producing Escherichia coli samples tested by PFGE, which included 158 foodborne disease clusters and 1174 PFGE patterns. There were 332 samples of Listeria monocytogenes tested by PFGE, including 35 foodborne disease clusters and 104 PFGE patterns. Sources linked to outbreaks included raw chicken, unpasteurized dairy products, various produce types, and undercooked beef among others. As next-generation sequencing (NGS) replaces PFGE, the impact of this transition is expected to be significant given the enhanced cluster detection power NGS brings. The measures presented here will be a reference baseline in future years. Mary Ann Liebert, Inc., publishers 2019-07-01 2019-07-09 /pmc/articles/PMC6653799/ /pubmed/30969140 http://dx.doi.org/10.1089/fpd.2018.2592 Text en © Jennifer L. Swoveland et al. 2019; Published by Mary Ann Liebert, Inc. This Open Access article is distributed under the terms of the Creative Commons License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Swoveland, Jennifer L.
Stewart, Laurie K.
Eckmann, Mary Kaye
Gee, Raymond
Allen, Krisandra J.
Vandegrift, Calley M.
Olson, Gina
Kang, Mi-Gyeong
Tran, Michael L.
Melius, Elizabeth
Hiatt, Brian
Gautom, Romesh K.
Perez-Osorio, Ailyn C.
Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title_full Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title_fullStr Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title_full_unstemmed Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title_short Laboratory Review of Foodborne Disease Investigations in Washington State 2007–2017
title_sort laboratory review of foodborne disease investigations in washington state 2007–2017
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6653799/
https://www.ncbi.nlm.nih.gov/pubmed/30969140
http://dx.doi.org/10.1089/fpd.2018.2592
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