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Measuring network rewiring over time
Recent years have seen tremendous advances in the scientific study of networks, as more and larger data sets of relationships among nodes have become available in many different fields. This has led to pathbreaking discoveries of near-universal network behavior over time, including the principle of...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6655784/ https://www.ncbi.nlm.nih.gov/pubmed/31339950 http://dx.doi.org/10.1371/journal.pone.0220295 |
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author | Han, Yicheol Goetz, Stephan J. |
author_facet | Han, Yicheol Goetz, Stephan J. |
author_sort | Han, Yicheol |
collection | PubMed |
description | Recent years have seen tremendous advances in the scientific study of networks, as more and larger data sets of relationships among nodes have become available in many different fields. This has led to pathbreaking discoveries of near-universal network behavior over time, including the principle of preferential attachment and the emergence of scaling in complex networks. Missing from the set of network analysis methods to date is a measure that describes for each node how its relationship (or links) with other nodes changes from one period to the next. Conventional measures of network change for the most part show how the degrees of a node change; these are scalar comparisons. Our contribution is to use, for the first time, the cosine similarity to capture not just the change in degrees of a node but its relationship to other nodes. These are vector (or matrix)-based comparisons, rather than scalar, and we refer to them as “rewiring” coefficients. We apply this measure to three different networks over time to show the differences in the two types of measures. In general, bigger increases in our rewiring measure are associated with larger increases in network density, but this is not always the case. |
format | Online Article Text |
id | pubmed-6655784 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-66557842019-08-07 Measuring network rewiring over time Han, Yicheol Goetz, Stephan J. PLoS One Research Article Recent years have seen tremendous advances in the scientific study of networks, as more and larger data sets of relationships among nodes have become available in many different fields. This has led to pathbreaking discoveries of near-universal network behavior over time, including the principle of preferential attachment and the emergence of scaling in complex networks. Missing from the set of network analysis methods to date is a measure that describes for each node how its relationship (or links) with other nodes changes from one period to the next. Conventional measures of network change for the most part show how the degrees of a node change; these are scalar comparisons. Our contribution is to use, for the first time, the cosine similarity to capture not just the change in degrees of a node but its relationship to other nodes. These are vector (or matrix)-based comparisons, rather than scalar, and we refer to them as “rewiring” coefficients. We apply this measure to three different networks over time to show the differences in the two types of measures. In general, bigger increases in our rewiring measure are associated with larger increases in network density, but this is not always the case. Public Library of Science 2019-07-24 /pmc/articles/PMC6655784/ /pubmed/31339950 http://dx.doi.org/10.1371/journal.pone.0220295 Text en © 2019 Han, Goetz http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Han, Yicheol Goetz, Stephan J. Measuring network rewiring over time |
title | Measuring network rewiring over time |
title_full | Measuring network rewiring over time |
title_fullStr | Measuring network rewiring over time |
title_full_unstemmed | Measuring network rewiring over time |
title_short | Measuring network rewiring over time |
title_sort | measuring network rewiring over time |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6655784/ https://www.ncbi.nlm.nih.gov/pubmed/31339950 http://dx.doi.org/10.1371/journal.pone.0220295 |
work_keys_str_mv | AT hanyicheol measuringnetworkrewiringovertime AT goetzstephanj measuringnetworkrewiringovertime |