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Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity

The dimensionality of a network’s collective activity is of increasing interest in neuroscience. This is because dimensionality provides a compact measure of how coordinated network-wide activity is, in terms of the number of modes (or degrees of freedom) that it can independently explore. A low num...

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Autores principales: Recanatesi, Stefano, Ocker, Gabriel Koch, Buice, Michael A., Shea-Brown, Eric
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6655892/
https://www.ncbi.nlm.nih.gov/pubmed/31299044
http://dx.doi.org/10.1371/journal.pcbi.1006446
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author Recanatesi, Stefano
Ocker, Gabriel Koch
Buice, Michael A.
Shea-Brown, Eric
author_facet Recanatesi, Stefano
Ocker, Gabriel Koch
Buice, Michael A.
Shea-Brown, Eric
author_sort Recanatesi, Stefano
collection PubMed
description The dimensionality of a network’s collective activity is of increasing interest in neuroscience. This is because dimensionality provides a compact measure of how coordinated network-wide activity is, in terms of the number of modes (or degrees of freedom) that it can independently explore. A low number of modes suggests a compressed low dimensional neural code and reveals interpretable dynamics [1], while findings of high dimension may suggest flexible computations [2, 3]. Here, we address the fundamental question of how dimensionality is related to connectivity, in both autonomous and stimulus-driven networks. Working with a simple spiking network model, we derive three main findings. First, the dimensionality of global activity patterns can be strongly, and systematically, regulated by local connectivity structures. Second, the dimensionality is a better indicator than average correlations in determining how constrained neural activity is. Third, stimulus evoked neural activity interacts systematically with neural connectivity patterns, leading to network responses of either greater or lesser dimensionality than the stimulus.
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spelling pubmed-66558922019-08-05 Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity Recanatesi, Stefano Ocker, Gabriel Koch Buice, Michael A. Shea-Brown, Eric PLoS Comput Biol Research Article The dimensionality of a network’s collective activity is of increasing interest in neuroscience. This is because dimensionality provides a compact measure of how coordinated network-wide activity is, in terms of the number of modes (or degrees of freedom) that it can independently explore. A low number of modes suggests a compressed low dimensional neural code and reveals interpretable dynamics [1], while findings of high dimension may suggest flexible computations [2, 3]. Here, we address the fundamental question of how dimensionality is related to connectivity, in both autonomous and stimulus-driven networks. Working with a simple spiking network model, we derive three main findings. First, the dimensionality of global activity patterns can be strongly, and systematically, regulated by local connectivity structures. Second, the dimensionality is a better indicator than average correlations in determining how constrained neural activity is. Third, stimulus evoked neural activity interacts systematically with neural connectivity patterns, leading to network responses of either greater or lesser dimensionality than the stimulus. Public Library of Science 2019-07-12 /pmc/articles/PMC6655892/ /pubmed/31299044 http://dx.doi.org/10.1371/journal.pcbi.1006446 Text en © 2019 Recanatesi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Recanatesi, Stefano
Ocker, Gabriel Koch
Buice, Michael A.
Shea-Brown, Eric
Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title_full Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title_fullStr Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title_full_unstemmed Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title_short Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity
title_sort dimensionality in recurrent spiking networks: global trends in activity and local origins in connectivity
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6655892/
https://www.ncbi.nlm.nih.gov/pubmed/31299044
http://dx.doi.org/10.1371/journal.pcbi.1006446
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