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Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol

The crystal structures of an inter­mediate, C(10)H(9)ClN(4)O, 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one (I), and two N-7 and N-9 regioisomeric oxetanocin nucleoside analogs, C(10)H(13)ClN(4)O, 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol (II) and C(10)H(11)ClN(4)O, 3-[...

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Autores principales: Yaseen, Ayat, Hassan, Muhammad Murtaza, Lee-Ruff, Edward, Audette, Gerald F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6658957/
https://www.ncbi.nlm.nih.gov/pubmed/31391955
http://dx.doi.org/10.1107/S2056989019004432
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author Yaseen, Ayat
Hassan, Muhammad Murtaza
Lee-Ruff, Edward
Audette, Gerald F.
author_facet Yaseen, Ayat
Hassan, Muhammad Murtaza
Lee-Ruff, Edward
Audette, Gerald F.
author_sort Yaseen, Ayat
collection PubMed
description The crystal structures of an inter­mediate, C(10)H(9)ClN(4)O, 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one (I), and two N-7 and N-9 regioisomeric oxetanocin nucleoside analogs, C(10)H(13)ClN(4)O, 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol (II) and C(10)H(11)ClN(4)O, 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol (IV), are reported. The crystal structures of the nucleoside analogs confirmed the reduction of the N-7- and N-9-substituted cyclo­butano­nes with LiAl(OtBu)(3) to occur with facial selectivity, yielding cis-nucleosides analogs similar to those found in nature. Reduction of the purine ring of the N-7 cyclo­butanone to a di­hydro­purine was observed for compound (II) but not for the purine ring of the N-9 cyclo­butanone on formation of compound (IV). In the crystal of (I), mol­ecules are linked by a weak Cl⋯O inter­action, forming a 2(1) helix along [010]. The helices are linked by offset π–π inter­actions [inter­centroid distance = 3.498 (1) Å], forming layers parallel to (101). In the crystal of (II), mol­ecules are linked by pairs of O—H⋯N hydrogen bonds, forming inversion dimers with an R (2) (2)(8) ring motif. The dimers are linked by O—H⋯N hydrogen bonds, forming chains along [001], which in turn are linked by C—H⋯π and offset π–π inter­actions [inter­centroid distance = 3.509 (1) Å], forming slabs parallel to the ac plane. In the crystal of (IV), mol­ecules are linked by O—H⋯N hydrogen bonds, forming chains along [101]. The chains are linked by C—H⋯N and C—H⋯O hydrogen bonds and C—H⋯π and offset π–π inter­actions [inter­centroid distance = 3.364 (1) Å], forming a supra­molecular framework.
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spelling pubmed-66589572019-08-07 Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol Yaseen, Ayat Hassan, Muhammad Murtaza Lee-Ruff, Edward Audette, Gerald F. Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of an inter­mediate, C(10)H(9)ClN(4)O, 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one (I), and two N-7 and N-9 regioisomeric oxetanocin nucleoside analogs, C(10)H(13)ClN(4)O, 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol (II) and C(10)H(11)ClN(4)O, 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol (IV), are reported. The crystal structures of the nucleoside analogs confirmed the reduction of the N-7- and N-9-substituted cyclo­butano­nes with LiAl(OtBu)(3) to occur with facial selectivity, yielding cis-nucleosides analogs similar to those found in nature. Reduction of the purine ring of the N-7 cyclo­butanone to a di­hydro­purine was observed for compound (II) but not for the purine ring of the N-9 cyclo­butanone on formation of compound (IV). In the crystal of (I), mol­ecules are linked by a weak Cl⋯O inter­action, forming a 2(1) helix along [010]. The helices are linked by offset π–π inter­actions [inter­centroid distance = 3.498 (1) Å], forming layers parallel to (101). In the crystal of (II), mol­ecules are linked by pairs of O—H⋯N hydrogen bonds, forming inversion dimers with an R (2) (2)(8) ring motif. The dimers are linked by O—H⋯N hydrogen bonds, forming chains along [001], which in turn are linked by C—H⋯π and offset π–π inter­actions [inter­centroid distance = 3.509 (1) Å], forming slabs parallel to the ac plane. In the crystal of (IV), mol­ecules are linked by O—H⋯N hydrogen bonds, forming chains along [101]. The chains are linked by C—H⋯N and C—H⋯O hydrogen bonds and C—H⋯π and offset π–π inter­actions [inter­centroid distance = 3.364 (1) Å], forming a supra­molecular framework. International Union of Crystallography 2019-05-03 /pmc/articles/PMC6658957/ /pubmed/31391955 http://dx.doi.org/10.1107/S2056989019004432 Text en © Yaseen et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Yaseen, Ayat
Hassan, Muhammad Murtaza
Lee-Ruff, Edward
Audette, Gerald F.
Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title_full Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title_fullStr Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title_full_unstemmed Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title_short Crystal structures of the synthetic inter­mediate 3-[(6-chloro-7H-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7H-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9H-purin-9-yl)meth­yl]cyclo­butan-1-ol
title_sort crystal structures of the synthetic inter­mediate 3-[(6-chloro-7h-purin-7-yl)meth­yl]cyclo­butan-1-one, and of two oxetanocin derivatives: 3-[(6-chloro-8,9-di­hydro-7h-purin-7-yl)meth­yl]cyclo­butan-1-ol and 3-[(6-chloro-9h-purin-9-yl)meth­yl]cyclo­butan-1-ol
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6658957/
https://www.ncbi.nlm.nih.gov/pubmed/31391955
http://dx.doi.org/10.1107/S2056989019004432
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