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Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds
Two bis-carbamoylmethylphosphine oxide compounds, namely {[(3-{[2-(diphenylphosphinoyl)ethanamido]methyl}benzyl)carbamoyl]methyl}diphenylphosphine oxide, C(36)H(34)N(2)O(4)P(2), (I), and diethyl [({2-[2-(diethoxyphosphinoyl)ethanamido]ethyl}carbamoyl)methyl]phosphonate, C(14)H...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659340/ https://www.ncbi.nlm.nih.gov/pubmed/31392011 http://dx.doi.org/10.1107/S205698901900820X |
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author | VanderWeide, Andrew I. Staples, Richard J. Biros, Shannon M. |
author_facet | VanderWeide, Andrew I. Staples, Richard J. Biros, Shannon M. |
author_sort | VanderWeide, Andrew I. |
collection | PubMed |
description | Two bis-carbamoylmethylphosphine oxide compounds, namely {[(3-{[2-(diphenylphosphinoyl)ethanamido]methyl}benzyl)carbamoyl]methyl}diphenylphosphine oxide, C(36)H(34)N(2)O(4)P(2), (I), and diethyl [({2-[2-(diethoxyphosphinoyl)ethanamido]ethyl}carbamoyl)methyl]phosphonate, C(14)H(30)N(2)O(8)P(2), (II), were synthesized via nucleophilic acyl substitution reactions between an ester and a primary amine. Hydrogen-bonding interactions are present in both crystals, but these interactions are intramolecular in the case of compound (I) and intermolecular in compound (II). Intramolecular π–π stacking interactions are also present in the crystal of compound (I) with a centroid–centroid distance of 3.9479 (12) Å and a dihedral angle of 9.56 (12)°. Intermolecular C—H⋯π interactions [C⋯centroid distance of 3.622 (2) Å, C—H⋯centroid angle of 146°] give rise to supramolecular sheets that lie in the ab plane. Key geometric features for compound (I) involve a nearly planar, trans-amide group with a C—N—C—C torsion angle of 169.12 (17)°, and a torsion angle of −108.39 (15)° between the phosphine oxide phosphorus atom and the amide nitrogen atom. For compound (II), the electron density corresponding to the phosphoryl group was disordered, and was modeled as two parts with a 0.7387 (19):0.2613 (19) occupancy ratio. Compound (II) also boasts a trans-amide group that approaches planarity with a C—N—C—C torsion angle of −176.50 (16)°. The hydrogen bonds in this structure are intermolecular, with a D⋯A distance of 2.883 (2) Å and a D—H⋯A angle of 175.0 (18)° between the amide hydrogen atom and the P=O oxygen atom. These non-covalent interactions create ribbons that run along the b-axis direction. |
format | Online Article Text |
id | pubmed-6659340 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-66593402019-08-07 Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds VanderWeide, Andrew I. Staples, Richard J. Biros, Shannon M. Acta Crystallogr E Crystallogr Commun Research Communications Two bis-carbamoylmethylphosphine oxide compounds, namely {[(3-{[2-(diphenylphosphinoyl)ethanamido]methyl}benzyl)carbamoyl]methyl}diphenylphosphine oxide, C(36)H(34)N(2)O(4)P(2), (I), and diethyl [({2-[2-(diethoxyphosphinoyl)ethanamido]ethyl}carbamoyl)methyl]phosphonate, C(14)H(30)N(2)O(8)P(2), (II), were synthesized via nucleophilic acyl substitution reactions between an ester and a primary amine. Hydrogen-bonding interactions are present in both crystals, but these interactions are intramolecular in the case of compound (I) and intermolecular in compound (II). Intramolecular π–π stacking interactions are also present in the crystal of compound (I) with a centroid–centroid distance of 3.9479 (12) Å and a dihedral angle of 9.56 (12)°. Intermolecular C—H⋯π interactions [C⋯centroid distance of 3.622 (2) Å, C—H⋯centroid angle of 146°] give rise to supramolecular sheets that lie in the ab plane. Key geometric features for compound (I) involve a nearly planar, trans-amide group with a C—N—C—C torsion angle of 169.12 (17)°, and a torsion angle of −108.39 (15)° between the phosphine oxide phosphorus atom and the amide nitrogen atom. For compound (II), the electron density corresponding to the phosphoryl group was disordered, and was modeled as two parts with a 0.7387 (19):0.2613 (19) occupancy ratio. Compound (II) also boasts a trans-amide group that approaches planarity with a C—N—C—C torsion angle of −176.50 (16)°. The hydrogen bonds in this structure are intermolecular, with a D⋯A distance of 2.883 (2) Å and a D—H⋯A angle of 175.0 (18)° between the amide hydrogen atom and the P=O oxygen atom. These non-covalent interactions create ribbons that run along the b-axis direction. International Union of Crystallography 2019-06-14 /pmc/articles/PMC6659340/ /pubmed/31392011 http://dx.doi.org/10.1107/S205698901900820X Text en © VanderWeide et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Communications VanderWeide, Andrew I. Staples, Richard J. Biros, Shannon M. Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title | Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title_full | Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title_fullStr | Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title_full_unstemmed | Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title_short | Crystal structures of two bis-carbamoylmethylphosphine oxide (CMPO) compounds |
title_sort | crystal structures of two bis-carbamoylmethylphosphine oxide (cmpo) compounds |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659340/ https://www.ncbi.nlm.nih.gov/pubmed/31392011 http://dx.doi.org/10.1107/S205698901900820X |
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