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Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses

MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION:...

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Detalles Bibliográficos
Autores principales: Spiller, Wes, Davies, Neil M, Palmer, Tom M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659377/
http://dx.doi.org/10.1093/ije/dyy195
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author Spiller, Wes
Davies, Neil M
Palmer, Tom M
author_facet Spiller, Wes
Davies, Neil M
Palmer, Tom M
author_sort Spiller, Wes
collection PubMed
description MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION: mrrobust is freely available as a Stata package. GENERAL FEATURES: The package includes inverse variance weighted estimation, as well as a range of median, modal and MR-Egger estimation methods. Using mrrobust, plots can be constructed visualizing each estimate either individually or simultaneously. The package also provides statistics such as [Formula: see text] , which are useful in assessing attenuation bias in causal estimates. AVAILABILITY: The software is freely available from GitHub [https://raw.github.com/remlapmot/mrrobust/master/].
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spelling pubmed-66593772019-08-02 Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses Spiller, Wes Davies, Neil M Palmer, Tom M Int J Epidemiol Software Application Profile MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION: mrrobust is freely available as a Stata package. GENERAL FEATURES: The package includes inverse variance weighted estimation, as well as a range of median, modal and MR-Egger estimation methods. Using mrrobust, plots can be constructed visualizing each estimate either individually or simultaneously. The package also provides statistics such as [Formula: see text] , which are useful in assessing attenuation bias in causal estimates. AVAILABILITY: The software is freely available from GitHub [https://raw.github.com/remlapmot/mrrobust/master/]. Oxford University Press 2019-06 2018-09-12 /pmc/articles/PMC6659377/ http://dx.doi.org/10.1093/ije/dyy195 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of the International Epidemiological Association. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software Application Profile
Spiller, Wes
Davies, Neil M
Palmer, Tom M
Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title_full Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title_fullStr Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title_full_unstemmed Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title_short Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
title_sort software application profile: mrrobust—a tool for performing two-sample summary mendelian randomization analyses
topic Software Application Profile
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659377/
http://dx.doi.org/10.1093/ije/dyy195
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