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Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses
MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION:...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659377/ http://dx.doi.org/10.1093/ije/dyy195 |
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author | Spiller, Wes Davies, Neil M Palmer, Tom M |
author_facet | Spiller, Wes Davies, Neil M Palmer, Tom M |
author_sort | Spiller, Wes |
collection | PubMed |
description | MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION: mrrobust is freely available as a Stata package. GENERAL FEATURES: The package includes inverse variance weighted estimation, as well as a range of median, modal and MR-Egger estimation methods. Using mrrobust, plots can be constructed visualizing each estimate either individually or simultaneously. The package also provides statistics such as [Formula: see text] , which are useful in assessing attenuation bias in causal estimates. AVAILABILITY: The software is freely available from GitHub [https://raw.github.com/remlapmot/mrrobust/master/]. |
format | Online Article Text |
id | pubmed-6659377 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-66593772019-08-02 Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses Spiller, Wes Davies, Neil M Palmer, Tom M Int J Epidemiol Software Application Profile MOTIVATION: In recent years, Mendelian randomization analysis using summary data from genome-wide association studies has become a popular approach for investigating causal relationships in epidemiology. The mrrobust Stata package implements several of the recently developed methods. IMPLEMENTATION: mrrobust is freely available as a Stata package. GENERAL FEATURES: The package includes inverse variance weighted estimation, as well as a range of median, modal and MR-Egger estimation methods. Using mrrobust, plots can be constructed visualizing each estimate either individually or simultaneously. The package also provides statistics such as [Formula: see text] , which are useful in assessing attenuation bias in causal estimates. AVAILABILITY: The software is freely available from GitHub [https://raw.github.com/remlapmot/mrrobust/master/]. Oxford University Press 2019-06 2018-09-12 /pmc/articles/PMC6659377/ http://dx.doi.org/10.1093/ije/dyy195 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of the International Epidemiological Association. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Software Application Profile Spiller, Wes Davies, Neil M Palmer, Tom M Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title | Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title_full | Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title_fullStr | Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title_full_unstemmed | Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title_short | Software application profile: mrrobust—a tool for performing two-sample summary Mendelian randomization analyses |
title_sort | software application profile: mrrobust—a tool for performing two-sample summary mendelian randomization analyses |
topic | Software Application Profile |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659377/ http://dx.doi.org/10.1093/ije/dyy195 |
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