Cargando…

DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data

The well-known hazards of repurposing data make Data Quality (DQ) assessment a vital step towards ensuring valid results regardless of analytical methods. However, there is no systematic process to implement DQ assessments for secondary uses of clinical data. This paper presents DataGauge, a systema...

Descripción completa

Detalles Bibliográficos
Autores principales: Diaz-Garelli, Jose-Franck, Bernstam, Elmer V., Lee, MinJae, Hwang, Kevin O., Rahbar, Mohammad H., Johnson, Todd R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ubiquity Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659577/
https://www.ncbi.nlm.nih.gov/pubmed/31367649
http://dx.doi.org/10.5334/egems.286
_version_ 1783439164060991488
author Diaz-Garelli, Jose-Franck
Bernstam, Elmer V.
Lee, MinJae
Hwang, Kevin O.
Rahbar, Mohammad H.
Johnson, Todd R.
author_facet Diaz-Garelli, Jose-Franck
Bernstam, Elmer V.
Lee, MinJae
Hwang, Kevin O.
Rahbar, Mohammad H.
Johnson, Todd R.
author_sort Diaz-Garelli, Jose-Franck
collection PubMed
description The well-known hazards of repurposing data make Data Quality (DQ) assessment a vital step towards ensuring valid results regardless of analytical methods. However, there is no systematic process to implement DQ assessments for secondary uses of clinical data. This paper presents DataGauge, a systematic process for designing and implementing DQ assessments to evaluate repurposed data for a specific secondary use. DataGauge is composed of five steps: (1) Define information needs, (2) Develop a formal Data Needs Model (DNM), (3) Use the DNM and DQ theory to develop goal-specific DQ assessment requirements, (4) Extract DNM-specified data, and (5) Evaluate according to DQ requirements. DataGauge’s main contribution is integrating general DQ theory and DQ assessment methods into a systematic process. This process supports the integration and practical implementation of existing Electronic Health Record-specific DQ assessment guidelines. DataGauge also provides an initial theory-based guidance framework that ties the DNM to DQ testing methods for each DQ dimension to aid the design of DQ assessments. This framework can be augmented with existing DQ guidelines to enable systematic assessment. DataGauge sets the stage for future systematic DQ assessment research by defining an assessment process, capable of adapting to a broad range of clinical datasets and secondary uses. Defining DataGauge sets the stage for new research directions such as DQ theory integration, DQ requirements portability research, DQ assessment tool development and DQ assessment tool usability.
format Online
Article
Text
id pubmed-6659577
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Ubiquity Press
record_format MEDLINE/PubMed
spelling pubmed-66595772019-07-31 DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data Diaz-Garelli, Jose-Franck Bernstam, Elmer V. Lee, MinJae Hwang, Kevin O. Rahbar, Mohammad H. Johnson, Todd R. EGEMS (Wash DC) Model/Framework The well-known hazards of repurposing data make Data Quality (DQ) assessment a vital step towards ensuring valid results regardless of analytical methods. However, there is no systematic process to implement DQ assessments for secondary uses of clinical data. This paper presents DataGauge, a systematic process for designing and implementing DQ assessments to evaluate repurposed data for a specific secondary use. DataGauge is composed of five steps: (1) Define information needs, (2) Develop a formal Data Needs Model (DNM), (3) Use the DNM and DQ theory to develop goal-specific DQ assessment requirements, (4) Extract DNM-specified data, and (5) Evaluate according to DQ requirements. DataGauge’s main contribution is integrating general DQ theory and DQ assessment methods into a systematic process. This process supports the integration and practical implementation of existing Electronic Health Record-specific DQ assessment guidelines. DataGauge also provides an initial theory-based guidance framework that ties the DNM to DQ testing methods for each DQ dimension to aid the design of DQ assessments. This framework can be augmented with existing DQ guidelines to enable systematic assessment. DataGauge sets the stage for future systematic DQ assessment research by defining an assessment process, capable of adapting to a broad range of clinical datasets and secondary uses. Defining DataGauge sets the stage for new research directions such as DQ theory integration, DQ requirements portability research, DQ assessment tool development and DQ assessment tool usability. Ubiquity Press 2019-07-25 /pmc/articles/PMC6659577/ /pubmed/31367649 http://dx.doi.org/10.5334/egems.286 Text en Copyright: © 2019 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (CC-BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. See http://creativecommons.org/licenses/by/4.0/.
spellingShingle Model/Framework
Diaz-Garelli, Jose-Franck
Bernstam, Elmer V.
Lee, MinJae
Hwang, Kevin O.
Rahbar, Mohammad H.
Johnson, Todd R.
DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title_full DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title_fullStr DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title_full_unstemmed DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title_short DataGauge: A Practical Process for Systematically Designing and Implementing Quality Assessments of Repurposed Clinical Data
title_sort datagauge: a practical process for systematically designing and implementing quality assessments of repurposed clinical data
topic Model/Framework
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6659577/
https://www.ncbi.nlm.nih.gov/pubmed/31367649
http://dx.doi.org/10.5334/egems.286
work_keys_str_mv AT diazgarellijosefranck datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata
AT bernstamelmerv datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata
AT leeminjae datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata
AT hwangkevino datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata
AT rahbarmohammadh datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata
AT johnsontoddr datagaugeapracticalprocessforsystematicallydesigningandimplementingqualityassessmentsofrepurposedclinicaldata