Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia

This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data...

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Detalles Bibliográficos
Autores principales: Talamantes-Becerra, Berenice, Carling, Jason, Kennedy, Karina, Gahan, Michelle E., Georges, Arthur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Immunology and Microbiology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6661468/
https://www.ncbi.nlm.nih.gov/pubmed/31384653
http://dx.doi.org/10.1016/j.dib.2019.104273
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author Talamantes-Becerra, Berenice
Carling, Jason
Kennedy, Karina
Gahan, Michelle E.
Georges, Arthur
author_facet Talamantes-Becerra, Berenice
Carling, Jason
Kennedy, Karina
Gahan, Michelle E.
Georges, Arthur
author_sort Talamantes-Becerra, Berenice
collection PubMed
description This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII.
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spelling pubmed-66614682019-08-05 Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia Talamantes-Becerra, Berenice Carling, Jason Kennedy, Karina Gahan, Michelle E. Georges, Arthur Data Brief Immunology and Microbiology This data article contains short-read sequences (length 30–69 bp) obtained from complexity-reduced genotyping by sequencing (GBS) of 165 samples bacterial isolates from hospital patients in the Australian Capital Territory, between 2013 and 2015. These samples represented 14 bacterial species. Data format is shown as filtered fastA files obtained from an Illumina HiSeq2500 sequencer. The experimental factors of this research used three complexity reduction methods with three combinations of restriction enzymes: PstI with MseI, PstI with HpaII and MseI with HpaII. Elsevier 2019-07-16 /pmc/articles/PMC6661468/ /pubmed/31384653 http://dx.doi.org/10.1016/j.dib.2019.104273 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Immunology and Microbiology
Talamantes-Becerra, Berenice
Carling, Jason
Kennedy, Karina
Gahan, Michelle E.
Georges, Arthur
Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title_full Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title_fullStr Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title_full_unstemmed Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title_short Short-read fastA files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in Australia
title_sort short-read fasta files dataset from complexity-reduced genotyping by sequencing data of bacterial isolates from a public hospital in australia
topic Immunology and Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6661468/
https://www.ncbi.nlm.nih.gov/pubmed/31384653
http://dx.doi.org/10.1016/j.dib.2019.104273
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