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Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study

OBJECTIVES: Development of digital biomarkers to predict treatment response to a digital behavioural intervention. DESIGN: Machine learning using random forest classifiers on data generated through the use of a digital therapeutic which delivers behavioural therapy to treat cardiometabolic disease....

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Autores principales: Guthrie, Nicole L, Carpenter, Jason, Edwards, Katherine L, Appelbaum, Kevin J, Dey, Sourav, Eisenberg, David M, Katz, David L, Berman, Mark A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6661657/
https://www.ncbi.nlm.nih.gov/pubmed/31337662
http://dx.doi.org/10.1136/bmjopen-2019-030710
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author Guthrie, Nicole L
Carpenter, Jason
Edwards, Katherine L
Appelbaum, Kevin J
Dey, Sourav
Eisenberg, David M
Katz, David L
Berman, Mark A
author_facet Guthrie, Nicole L
Carpenter, Jason
Edwards, Katherine L
Appelbaum, Kevin J
Dey, Sourav
Eisenberg, David M
Katz, David L
Berman, Mark A
author_sort Guthrie, Nicole L
collection PubMed
description OBJECTIVES: Development of digital biomarkers to predict treatment response to a digital behavioural intervention. DESIGN: Machine learning using random forest classifiers on data generated through the use of a digital therapeutic which delivers behavioural therapy to treat cardiometabolic disease. Data from 13 explanatory variables (biometric and engagement in nature) generated in the first 28 days of a 12-week intervention were used to train models. Two levels of response to treatment were predicted: (1) systolic change ≥10 mm Hg (SC model), and (2) shift down to a blood pressure category of elevated or better (ER model). Models were validated using leave-one-out cross validation and evaluated using area under the curve receiver operating characteristics (AUROC) and specificity- sensitivity. Ability to predict treatment response with a subset of nine variables, including app use and baseline blood pressure, was also tested (models SC-APP and ER-APP). SETTING: Data generated through ad libitum use of a digital therapeutic in the USA. PARTICIPANTS: Deidentified data from 135 adults with a starting blood pressure ≥130/80, who tracked blood pressure for at least 7 weeks using the digital therapeutic. RESULTS: The SC model had an AUROC of 0.82 and a sensitivity of 58% at a specificity of 90%. The ER model had an AUROC of 0.69 and a sensitivity of 32% at a specificity at 91%. Dropping explanatory variables related to blood pressure resulted in an AUROC of 0.72 with a sensitivity of 42% at a specificity of 90% for the SC-APP model and an AUROC of 0.53 for the ER-APP model. CONCLUSIONS: Machine learning was used to transform data from a digital therapeutic into digital biomarkers that predicted treatment response in individual participants. Digital biomarkers have potential to improve treatment outcomes in a digital behavioural intervention.
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spelling pubmed-66616572019-08-07 Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study Guthrie, Nicole L Carpenter, Jason Edwards, Katherine L Appelbaum, Kevin J Dey, Sourav Eisenberg, David M Katz, David L Berman, Mark A BMJ Open Cardiovascular Medicine OBJECTIVES: Development of digital biomarkers to predict treatment response to a digital behavioural intervention. DESIGN: Machine learning using random forest classifiers on data generated through the use of a digital therapeutic which delivers behavioural therapy to treat cardiometabolic disease. Data from 13 explanatory variables (biometric and engagement in nature) generated in the first 28 days of a 12-week intervention were used to train models. Two levels of response to treatment were predicted: (1) systolic change ≥10 mm Hg (SC model), and (2) shift down to a blood pressure category of elevated or better (ER model). Models were validated using leave-one-out cross validation and evaluated using area under the curve receiver operating characteristics (AUROC) and specificity- sensitivity. Ability to predict treatment response with a subset of nine variables, including app use and baseline blood pressure, was also tested (models SC-APP and ER-APP). SETTING: Data generated through ad libitum use of a digital therapeutic in the USA. PARTICIPANTS: Deidentified data from 135 adults with a starting blood pressure ≥130/80, who tracked blood pressure for at least 7 weeks using the digital therapeutic. RESULTS: The SC model had an AUROC of 0.82 and a sensitivity of 58% at a specificity of 90%. The ER model had an AUROC of 0.69 and a sensitivity of 32% at a specificity at 91%. Dropping explanatory variables related to blood pressure resulted in an AUROC of 0.72 with a sensitivity of 42% at a specificity of 90% for the SC-APP model and an AUROC of 0.53 for the ER-APP model. CONCLUSIONS: Machine learning was used to transform data from a digital therapeutic into digital biomarkers that predicted treatment response in individual participants. Digital biomarkers have potential to improve treatment outcomes in a digital behavioural intervention. BMJ Publishing Group 2019-07-23 /pmc/articles/PMC6661657/ /pubmed/31337662 http://dx.doi.org/10.1136/bmjopen-2019-030710 Text en © Author(s) (or their employer(s)) 2019. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/.
spellingShingle Cardiovascular Medicine
Guthrie, Nicole L
Carpenter, Jason
Edwards, Katherine L
Appelbaum, Kevin J
Dey, Sourav
Eisenberg, David M
Katz, David L
Berman, Mark A
Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title_full Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title_fullStr Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title_full_unstemmed Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title_short Emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
title_sort emergence of digital biomarkers to predict and modify treatment efficacy: machine learning study
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6661657/
https://www.ncbi.nlm.nih.gov/pubmed/31337662
http://dx.doi.org/10.1136/bmjopen-2019-030710
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