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Expression of calcification‐related ion transporters during blue mussel larval development
The physiological processes driving the rapid rates of calcification in larval bivalves are poorly understood. Here, we use a calcification substrate‐limited approach (low dissolved inorganic carbon, C (T)) and mRNA sequencing to identify proteins involved in bicarbonate acquisition during shell for...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6662379/ https://www.ncbi.nlm.nih.gov/pubmed/31380040 http://dx.doi.org/10.1002/ece3.5287 |
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author | Ramesh, Kirti Yarra, Tejaswi Clark, Melody S. John, Uwe Melzner, Frank |
author_facet | Ramesh, Kirti Yarra, Tejaswi Clark, Melody S. John, Uwe Melzner, Frank |
author_sort | Ramesh, Kirti |
collection | PubMed |
description | The physiological processes driving the rapid rates of calcification in larval bivalves are poorly understood. Here, we use a calcification substrate‐limited approach (low dissolved inorganic carbon, C (T)) and mRNA sequencing to identify proteins involved in bicarbonate acquisition during shell formation. As a secondary approach, we examined expression of ion transport and shell matrix proteins (SMPs) over the course of larval development and shell formation. We reared four families of Mytilus edulis under ambient (ca. 1865 µmol/kg) and low C (T) (ca. 941 µmol/kg) conditions and compared expression patterns at six developmental time points. Larvae reared under low C (T) exhibited a developmental delay, and a small subset of contigs was differentially regulated between ambient and low C (T) conditions. Of particular note was the identification of one contig encoding an anion transporter (SLC26) which was strongly upregulated (2.3–2.9 fold) under low C (T) conditions. By analyzing gene expression profiles over the course of larval development, we are able to isolate sequences encoding ion transport and SMPs to enhance our understanding of cellular pathways underlying larval calcification processes. In particular, we observe the differential expression of contigs encoding SLC4 family members (sodium bicarbonate cotransporters, anion exchangers), calcium‐transporting ATPases, sodium/calcium exchangers, and SMPs such as nacrein, tyrosinase, and transcripts related to chitin production. With a range of candidate genes, this work identifies ion transport pathways in bivalve larvae and by applying comparative genomics to investigate temporal expression patterns, provides a foundation for further studies to functionally characterize the proteins involved in larval calcification. |
format | Online Article Text |
id | pubmed-6662379 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66623792019-08-02 Expression of calcification‐related ion transporters during blue mussel larval development Ramesh, Kirti Yarra, Tejaswi Clark, Melody S. John, Uwe Melzner, Frank Ecol Evol Original Research The physiological processes driving the rapid rates of calcification in larval bivalves are poorly understood. Here, we use a calcification substrate‐limited approach (low dissolved inorganic carbon, C (T)) and mRNA sequencing to identify proteins involved in bicarbonate acquisition during shell formation. As a secondary approach, we examined expression of ion transport and shell matrix proteins (SMPs) over the course of larval development and shell formation. We reared four families of Mytilus edulis under ambient (ca. 1865 µmol/kg) and low C (T) (ca. 941 µmol/kg) conditions and compared expression patterns at six developmental time points. Larvae reared under low C (T) exhibited a developmental delay, and a small subset of contigs was differentially regulated between ambient and low C (T) conditions. Of particular note was the identification of one contig encoding an anion transporter (SLC26) which was strongly upregulated (2.3–2.9 fold) under low C (T) conditions. By analyzing gene expression profiles over the course of larval development, we are able to isolate sequences encoding ion transport and SMPs to enhance our understanding of cellular pathways underlying larval calcification processes. In particular, we observe the differential expression of contigs encoding SLC4 family members (sodium bicarbonate cotransporters, anion exchangers), calcium‐transporting ATPases, sodium/calcium exchangers, and SMPs such as nacrein, tyrosinase, and transcripts related to chitin production. With a range of candidate genes, this work identifies ion transport pathways in bivalve larvae and by applying comparative genomics to investigate temporal expression patterns, provides a foundation for further studies to functionally characterize the proteins involved in larval calcification. John Wiley and Sons Inc. 2019-05-29 /pmc/articles/PMC6662379/ /pubmed/31380040 http://dx.doi.org/10.1002/ece3.5287 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Ramesh, Kirti Yarra, Tejaswi Clark, Melody S. John, Uwe Melzner, Frank Expression of calcification‐related ion transporters during blue mussel larval development |
title | Expression of calcification‐related ion transporters during blue mussel larval development |
title_full | Expression of calcification‐related ion transporters during blue mussel larval development |
title_fullStr | Expression of calcification‐related ion transporters during blue mussel larval development |
title_full_unstemmed | Expression of calcification‐related ion transporters during blue mussel larval development |
title_short | Expression of calcification‐related ion transporters during blue mussel larval development |
title_sort | expression of calcification‐related ion transporters during blue mussel larval development |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6662379/ https://www.ncbi.nlm.nih.gov/pubmed/31380040 http://dx.doi.org/10.1002/ece3.5287 |
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