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Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids

The study aim was to utilise multiple feature selection methods in order to select the most important parameters from clinical patient data for high-intensity focused ultrasound (HIFU) treatment outcome classification in uterine fibroids. The study was retrospective using patient data from 66 HIFU t...

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Autores principales: Suomi, Visa, Komar, Gaber, Sainio, Teija, Joronen, Kirsi, Perheentupa, Antti, Blanco Sequeiros, Roberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6662821/
https://www.ncbi.nlm.nih.gov/pubmed/31358836
http://dx.doi.org/10.1038/s41598-019-47484-y
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author Suomi, Visa
Komar, Gaber
Sainio, Teija
Joronen, Kirsi
Perheentupa, Antti
Blanco Sequeiros, Roberto
author_facet Suomi, Visa
Komar, Gaber
Sainio, Teija
Joronen, Kirsi
Perheentupa, Antti
Blanco Sequeiros, Roberto
author_sort Suomi, Visa
collection PubMed
description The study aim was to utilise multiple feature selection methods in order to select the most important parameters from clinical patient data for high-intensity focused ultrasound (HIFU) treatment outcome classification in uterine fibroids. The study was retrospective using patient data from 66 HIFU treatments with 89 uterine fibroids. A total of 39 features were extracted from the patient data and 14 different filter-based feature selection methods were used to select the most informative features. The selected features were then used in a support vector classification (SVC) model to evaluate the performance of these parameters in predicting HIFU therapy outcome. The therapy outcome was defined as non-perfused volume (NPV) ratio in three classes: <30%, 30–80% or >80%. The ten most highly ranked features in order were: fibroid diameter, subcutaneous fat thickness, fibroid volume, fibroid distance, Funaki type I, fundus location, gravidity, Funaki type III, submucosal fibroid type and urinary symptoms. The maximum F1-micro classification score was 0.63 using the top ten features from Mutual Information Maximisation (MIM) and Joint Mutual Information (JMI) feature selection methods. Classification performance of HIFU therapy outcome prediction in uterine fibroids is highly dependent on the chosen feature set which should be determined prior using different classifiers.
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spelling pubmed-66628212019-08-02 Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids Suomi, Visa Komar, Gaber Sainio, Teija Joronen, Kirsi Perheentupa, Antti Blanco Sequeiros, Roberto Sci Rep Article The study aim was to utilise multiple feature selection methods in order to select the most important parameters from clinical patient data for high-intensity focused ultrasound (HIFU) treatment outcome classification in uterine fibroids. The study was retrospective using patient data from 66 HIFU treatments with 89 uterine fibroids. A total of 39 features were extracted from the patient data and 14 different filter-based feature selection methods were used to select the most informative features. The selected features were then used in a support vector classification (SVC) model to evaluate the performance of these parameters in predicting HIFU therapy outcome. The therapy outcome was defined as non-perfused volume (NPV) ratio in three classes: <30%, 30–80% or >80%. The ten most highly ranked features in order were: fibroid diameter, subcutaneous fat thickness, fibroid volume, fibroid distance, Funaki type I, fundus location, gravidity, Funaki type III, submucosal fibroid type and urinary symptoms. The maximum F1-micro classification score was 0.63 using the top ten features from Mutual Information Maximisation (MIM) and Joint Mutual Information (JMI) feature selection methods. Classification performance of HIFU therapy outcome prediction in uterine fibroids is highly dependent on the chosen feature set which should be determined prior using different classifiers. Nature Publishing Group UK 2019-07-29 /pmc/articles/PMC6662821/ /pubmed/31358836 http://dx.doi.org/10.1038/s41598-019-47484-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Suomi, Visa
Komar, Gaber
Sainio, Teija
Joronen, Kirsi
Perheentupa, Antti
Blanco Sequeiros, Roberto
Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title_full Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title_fullStr Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title_full_unstemmed Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title_short Comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
title_sort comprehensive feature selection for classifying the treatment outcome of high-intensity ultrasound therapy in uterine fibroids
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6662821/
https://www.ncbi.nlm.nih.gov/pubmed/31358836
http://dx.doi.org/10.1038/s41598-019-47484-y
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