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100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids
We sequentially assigned the fully-protonated capsids made from core proteins of the Hepatitis B virus using proton detection at 100 kHz magic-angle spinning (MAS) in 0.7 mm rotors and compare sensitivity and assignment completeness to previously obtained assignments using carbon-detection technique...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668038/ https://www.ncbi.nlm.nih.gov/pubmed/31396521 http://dx.doi.org/10.3389/fmolb.2019.00058 |
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author | Lecoq, Lauriane Schledorn, Maarten Wang, Shishan Smith-Penzel, Susanne Malär, Alexander A. Callon, Morgane Nassal, Michael Meier, Beat H. Böckmann, Anja |
author_facet | Lecoq, Lauriane Schledorn, Maarten Wang, Shishan Smith-Penzel, Susanne Malär, Alexander A. Callon, Morgane Nassal, Michael Meier, Beat H. Böckmann, Anja |
author_sort | Lecoq, Lauriane |
collection | PubMed |
description | We sequentially assigned the fully-protonated capsids made from core proteins of the Hepatitis B virus using proton detection at 100 kHz magic-angle spinning (MAS) in 0.7 mm rotors and compare sensitivity and assignment completeness to previously obtained assignments using carbon-detection techniques in 3.2 mm rotors and 17.5 kHz MAS. We show that proton detection shows a global gain of a factor ~50 in mass sensitivity, but that signal-to-noise ratios and completeness of the assignment was somewhat higher for carbon-detected experiments for comparable experimental times. We also show that deuteration and H(N) back protonation improves the proton linewidth at 100 kHz MAS by a factor of 1.5, from an average of 170–110 Hz, and by a factor of 1.3 compared to deuterated capsids at 60 kHz MAS in a 1.3 mm rotor. Yet, several H(N) protons cannot be back-exchanged due to solvent inaccessibility, which results in a total of 15% of the amides missing in the spectra. |
format | Online Article Text |
id | pubmed-6668038 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66680382019-08-08 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids Lecoq, Lauriane Schledorn, Maarten Wang, Shishan Smith-Penzel, Susanne Malär, Alexander A. Callon, Morgane Nassal, Michael Meier, Beat H. Böckmann, Anja Front Mol Biosci Molecular Biosciences We sequentially assigned the fully-protonated capsids made from core proteins of the Hepatitis B virus using proton detection at 100 kHz magic-angle spinning (MAS) in 0.7 mm rotors and compare sensitivity and assignment completeness to previously obtained assignments using carbon-detection techniques in 3.2 mm rotors and 17.5 kHz MAS. We show that proton detection shows a global gain of a factor ~50 in mass sensitivity, but that signal-to-noise ratios and completeness of the assignment was somewhat higher for carbon-detected experiments for comparable experimental times. We also show that deuteration and H(N) back protonation improves the proton linewidth at 100 kHz MAS by a factor of 1.5, from an average of 170–110 Hz, and by a factor of 1.3 compared to deuterated capsids at 60 kHz MAS in a 1.3 mm rotor. Yet, several H(N) protons cannot be back-exchanged due to solvent inaccessibility, which results in a total of 15% of the amides missing in the spectra. Frontiers Media S.A. 2019-07-24 /pmc/articles/PMC6668038/ /pubmed/31396521 http://dx.doi.org/10.3389/fmolb.2019.00058 Text en Copyright © 2019 Lecoq, Schledorn, Wang, Smith-Penzel, Malär, Callon, Nassal, Meier and Böckmann. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Lecoq, Lauriane Schledorn, Maarten Wang, Shishan Smith-Penzel, Susanne Malär, Alexander A. Callon, Morgane Nassal, Michael Meier, Beat H. Böckmann, Anja 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title | 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title_full | 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title_fullStr | 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title_full_unstemmed | 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title_short | 100 kHz MAS Proton-Detected NMR Spectroscopy of Hepatitis B Virus Capsids |
title_sort | 100 khz mas proton-detected nmr spectroscopy of hepatitis b virus capsids |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668038/ https://www.ncbi.nlm.nih.gov/pubmed/31396521 http://dx.doi.org/10.3389/fmolb.2019.00058 |
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