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Highlighted role of VEGFA in follow up of celiac disease
AIM: Evolution of gene expression change of intestine tissue in celiac patients to find a new molecular prospective of disease is the aim of this study. BACKGROUND: Celiac disease (CD) as an autoimmune disease is known as an immune reaction response to the gluten in patients. It is reported that gen...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shaheed Beheshti University of Medical Sciences
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668760/ https://www.ncbi.nlm.nih.gov/pubmed/31528310 |
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author | Rezaei-Tavirani, Sina Rostami-Nejad, Mohammad Montazar, Fatemeh |
author_facet | Rezaei-Tavirani, Sina Rostami-Nejad, Mohammad Montazar, Fatemeh |
author_sort | Rezaei-Tavirani, Sina |
collection | PubMed |
description | AIM: Evolution of gene expression change of intestine tissue in celiac patients to find a new molecular prospective of disease is the aim of this study. BACKGROUND: Celiac disease (CD) as an autoimmune disease is known as an immune reaction response to the gluten in patients. It is reported that genetic and environmental conditions are important in onset and progress of CD. METHODS: gene expression profiles of intestinal tissue in 12 celiac patients and 12 healthy controls from gene expression omnibus (GEO) were downloaded and verified by boxplot analysis. The significant and selected differentially expressed genes (DEGs) were included protein-protein interaction (PPI) network analysis. The central nodes were identified by network analyzer. RESULTS: The network was constructed from 161 query DEGs and 50 additional neighbors. GTF2H1, VEGFA, SUMO1, RAD51, MED21, BBP4, LEP, and MAP2K7 as potent hub nodes LRP5, RABGEF1, BCAS2, DYRK1B, AOC3, RABL2A, CRTAP, VEGFA, and SPOPL as potent bottlenecks are introduced as crucial nodes. CONCLUSION: Among the crucial DEGs, Vascular endothelial growth factor A (VEGFA) was highlighted as an important biomarker candidate for follow up of celiac patients. |
format | Online Article Text |
id | pubmed-6668760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Shaheed Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-66687602019-09-16 Highlighted role of VEGFA in follow up of celiac disease Rezaei-Tavirani, Sina Rostami-Nejad, Mohammad Montazar, Fatemeh Gastroenterol Hepatol Bed Bench Original Article AIM: Evolution of gene expression change of intestine tissue in celiac patients to find a new molecular prospective of disease is the aim of this study. BACKGROUND: Celiac disease (CD) as an autoimmune disease is known as an immune reaction response to the gluten in patients. It is reported that genetic and environmental conditions are important in onset and progress of CD. METHODS: gene expression profiles of intestinal tissue in 12 celiac patients and 12 healthy controls from gene expression omnibus (GEO) were downloaded and verified by boxplot analysis. The significant and selected differentially expressed genes (DEGs) were included protein-protein interaction (PPI) network analysis. The central nodes were identified by network analyzer. RESULTS: The network was constructed from 161 query DEGs and 50 additional neighbors. GTF2H1, VEGFA, SUMO1, RAD51, MED21, BBP4, LEP, and MAP2K7 as potent hub nodes LRP5, RABGEF1, BCAS2, DYRK1B, AOC3, RABL2A, CRTAP, VEGFA, and SPOPL as potent bottlenecks are introduced as crucial nodes. CONCLUSION: Among the crucial DEGs, Vascular endothelial growth factor A (VEGFA) was highlighted as an important biomarker candidate for follow up of celiac patients. Shaheed Beheshti University of Medical Sciences 2019 /pmc/articles/PMC6668760/ /pubmed/31528310 Text en ©2019 RIGLD, Research Institute for Gastroenterology and Liver Diseases This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Rezaei-Tavirani, Sina Rostami-Nejad, Mohammad Montazar, Fatemeh Highlighted role of VEGFA in follow up of celiac disease |
title | Highlighted role of VEGFA in follow up of celiac disease |
title_full | Highlighted role of VEGFA in follow up of celiac disease |
title_fullStr | Highlighted role of VEGFA in follow up of celiac disease |
title_full_unstemmed | Highlighted role of VEGFA in follow up of celiac disease |
title_short | Highlighted role of VEGFA in follow up of celiac disease |
title_sort | highlighted role of vegfa in follow up of celiac disease |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668760/ https://www.ncbi.nlm.nih.gov/pubmed/31528310 |
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