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Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards

Monitor lizards are unique among ectothermic reptiles in that they have high aerobic capacity and distinctive cardiovascular physiology resembling that of endothermic mammals. Here, we sequence the genome of the Komodo dragon (Varanus komodoensis), the largest extant monitor lizard, and generate a h...

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Autores principales: Lind, Abigail L., Lai, Yvonne Y.Y., Mostovoy, Yulia, Holloway, Alisha K., Iannucci, Alessio, Mak, Angel C.Y., Fondi, Marco, Orlandini, Valerio, Eckalbar, Walter L., Milan, Massimo, Rovatsos, Michail, Kichigin, Ilya G., Makunin, Alex I., Johnson Pokorná, Martina, Altmanová, Marie, Trifonov, Vladimir A., Schijlen, Elio, Kratochvíl, Lukáš, Fani, Renato, Velenský, Petr, Rehák, Ivan, Patarnello, Tomaso, Jessop, Tim S., Hicks, James W., Ryder, Oliver A., Mendelson, Joseph R., Ciofi, Claudio, Kwok, Pui-Yan, Pollard, Katherine S., Bruneau, Benoit G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668926/
https://www.ncbi.nlm.nih.gov/pubmed/31358948
http://dx.doi.org/10.1038/s41559-019-0945-8
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author Lind, Abigail L.
Lai, Yvonne Y.Y.
Mostovoy, Yulia
Holloway, Alisha K.
Iannucci, Alessio
Mak, Angel C.Y.
Fondi, Marco
Orlandini, Valerio
Eckalbar, Walter L.
Milan, Massimo
Rovatsos, Michail
Kichigin, Ilya G.
Makunin, Alex I.
Johnson Pokorná, Martina
Altmanová, Marie
Trifonov, Vladimir A.
Schijlen, Elio
Kratochvíl, Lukáš
Fani, Renato
Velenský, Petr
Rehák, Ivan
Patarnello, Tomaso
Jessop, Tim S.
Hicks, James W.
Ryder, Oliver A.
Mendelson, Joseph R.
Ciofi, Claudio
Kwok, Pui-Yan
Pollard, Katherine S.
Bruneau, Benoit G.
author_facet Lind, Abigail L.
Lai, Yvonne Y.Y.
Mostovoy, Yulia
Holloway, Alisha K.
Iannucci, Alessio
Mak, Angel C.Y.
Fondi, Marco
Orlandini, Valerio
Eckalbar, Walter L.
Milan, Massimo
Rovatsos, Michail
Kichigin, Ilya G.
Makunin, Alex I.
Johnson Pokorná, Martina
Altmanová, Marie
Trifonov, Vladimir A.
Schijlen, Elio
Kratochvíl, Lukáš
Fani, Renato
Velenský, Petr
Rehák, Ivan
Patarnello, Tomaso
Jessop, Tim S.
Hicks, James W.
Ryder, Oliver A.
Mendelson, Joseph R.
Ciofi, Claudio
Kwok, Pui-Yan
Pollard, Katherine S.
Bruneau, Benoit G.
author_sort Lind, Abigail L.
collection PubMed
description Monitor lizards are unique among ectothermic reptiles in that they have high aerobic capacity and distinctive cardiovascular physiology resembling that of endothermic mammals. Here, we sequence the genome of the Komodo dragon (Varanus komodoensis), the largest extant monitor lizard, and generate a high resolution de novo chromosome-assigned genome assembly for V. komodoensis using a hybrid approach of long-range sequencing and single molecule optical mapping. Comparing the genome of V. komodoensis with those of related species, we find evidence of positive selection in pathways related to energy metabolism, cardiovascular homeostasis, and hemostasis. We also show species-specific expansions of a chemoreceptor gene family related to pheromone and kairomone sensing in V. komodoensis and other lizard lineages. Together, these evolutionary signatures of adaptation reveal genetic underpinnings of the unique Komodo dragon sensory and cardiovascular systems, and suggest that selective pressure altered hemostasis genes to help Komodo dragons evade the anticoagulant effects of their own saliva. The Komodo dragon genome is an important resource for understanding the biology of monitor lizards and reptiles worldwide.
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spelling pubmed-66689262020-01-29 Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards Lind, Abigail L. Lai, Yvonne Y.Y. Mostovoy, Yulia Holloway, Alisha K. Iannucci, Alessio Mak, Angel C.Y. Fondi, Marco Orlandini, Valerio Eckalbar, Walter L. Milan, Massimo Rovatsos, Michail Kichigin, Ilya G. Makunin, Alex I. Johnson Pokorná, Martina Altmanová, Marie Trifonov, Vladimir A. Schijlen, Elio Kratochvíl, Lukáš Fani, Renato Velenský, Petr Rehák, Ivan Patarnello, Tomaso Jessop, Tim S. Hicks, James W. Ryder, Oliver A. Mendelson, Joseph R. Ciofi, Claudio Kwok, Pui-Yan Pollard, Katherine S. Bruneau, Benoit G. Nat Ecol Evol Article Monitor lizards are unique among ectothermic reptiles in that they have high aerobic capacity and distinctive cardiovascular physiology resembling that of endothermic mammals. Here, we sequence the genome of the Komodo dragon (Varanus komodoensis), the largest extant monitor lizard, and generate a high resolution de novo chromosome-assigned genome assembly for V. komodoensis using a hybrid approach of long-range sequencing and single molecule optical mapping. Comparing the genome of V. komodoensis with those of related species, we find evidence of positive selection in pathways related to energy metabolism, cardiovascular homeostasis, and hemostasis. We also show species-specific expansions of a chemoreceptor gene family related to pheromone and kairomone sensing in V. komodoensis and other lizard lineages. Together, these evolutionary signatures of adaptation reveal genetic underpinnings of the unique Komodo dragon sensory and cardiovascular systems, and suggest that selective pressure altered hemostasis genes to help Komodo dragons evade the anticoagulant effects of their own saliva. The Komodo dragon genome is an important resource for understanding the biology of monitor lizards and reptiles worldwide. 2019-07-29 2019-08 /pmc/articles/PMC6668926/ /pubmed/31358948 http://dx.doi.org/10.1038/s41559-019-0945-8 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Lind, Abigail L.
Lai, Yvonne Y.Y.
Mostovoy, Yulia
Holloway, Alisha K.
Iannucci, Alessio
Mak, Angel C.Y.
Fondi, Marco
Orlandini, Valerio
Eckalbar, Walter L.
Milan, Massimo
Rovatsos, Michail
Kichigin, Ilya G.
Makunin, Alex I.
Johnson Pokorná, Martina
Altmanová, Marie
Trifonov, Vladimir A.
Schijlen, Elio
Kratochvíl, Lukáš
Fani, Renato
Velenský, Petr
Rehák, Ivan
Patarnello, Tomaso
Jessop, Tim S.
Hicks, James W.
Ryder, Oliver A.
Mendelson, Joseph R.
Ciofi, Claudio
Kwok, Pui-Yan
Pollard, Katherine S.
Bruneau, Benoit G.
Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title_full Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title_fullStr Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title_full_unstemmed Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title_short Genome of the Komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
title_sort genome of the komodo dragon reveals adaptations in the cardiovascular and chemosensory systems of monitor lizards
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6668926/
https://www.ncbi.nlm.nih.gov/pubmed/31358948
http://dx.doi.org/10.1038/s41559-019-0945-8
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