Cargando…
Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury
With the application of genetic testing to contemporary medical diagnostics and practice, it has become apparent that the phenotypes of many disorders are modulated by host genetic factors. The aim of the current study was to determine whether selected single nucleotide polymorphisms (SNPs) unrelate...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6671782/ https://www.ncbi.nlm.nih.gov/pubmed/31388624 http://dx.doi.org/10.1002/hep4.1382 |
_version_ | 1783440544590987264 |
---|---|
author | Bonkovsky, Herbert L. Severson, Tyler Nicoletti, Paola Barnhart, Huiman Serrano, Jose Chalasani, Naga Fontana, Robert J. Watkins, Paul B. Navarro, Victor Stolz, Andrew Daly, Ann K. Aithal, Guruparasad P. Odin, Joseph |
author_facet | Bonkovsky, Herbert L. Severson, Tyler Nicoletti, Paola Barnhart, Huiman Serrano, Jose Chalasani, Naga Fontana, Robert J. Watkins, Paul B. Navarro, Victor Stolz, Andrew Daly, Ann K. Aithal, Guruparasad P. Odin, Joseph |
author_sort | Bonkovsky, Herbert L. |
collection | PubMed |
description | With the application of genetic testing to contemporary medical diagnostics and practice, it has become apparent that the phenotypes of many disorders are modulated by host genetic factors. The aim of the current study was to determine whether selected single nucleotide polymorphisms (SNPs) unrelated to the human leukocyte antigen region or other immune pathways, including those associated with nonalcoholic fatty liver disease (NAFLD), may influence development, severity, or outcomes of drug‐induced liver injury (DILI). Thirteen variants previously associated with NAFLD and/or selected other liver diseases were tested in 832 Caucasian DILI cases and 10,397 Caucasian population controls. DILI cases were attributed to multiple agents (177 individual drugs), with 56 cases due to herbal/dietary supplement products. Allele frequencies were imputed from recent genome‐wide association studies and compared to those for European control samples from the Gnomad database. Significance was tested by linear regression or logistic regression, depending on the nature of the trait. Any variant that passed the Bonferroni threshold of P < 0.0004 ([Formula: see text]) was considered a significant association. None of the variants proved to be significantly associated with DILI as phenotype nor with any of the selected severity traits. Among the variants studied, rs1421085, found in the fat mass and obesity associated (FTO) gene, showed a marginal protective effect (odds ratio, 0.8; 95% confidence interval, 0.77‐0.95; P = 0.005). None of the genetic polymorphisms tested were significantly associated with the risk of development, severity, or outcome of DILI. Conclusion: SNPs implicated in common liver diseases, such as NAFLD, do not play a substantial role in DILI pathogenesis across agents. It remains possible that these variants could be involved with DILI due to single agents, but this will require the evaluation of larger numbers of bona fide cases. |
format | Online Article Text |
id | pubmed-6671782 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66717822019-08-06 Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury Bonkovsky, Herbert L. Severson, Tyler Nicoletti, Paola Barnhart, Huiman Serrano, Jose Chalasani, Naga Fontana, Robert J. Watkins, Paul B. Navarro, Victor Stolz, Andrew Daly, Ann K. Aithal, Guruparasad P. Odin, Joseph Hepatol Commun Original Articles With the application of genetic testing to contemporary medical diagnostics and practice, it has become apparent that the phenotypes of many disorders are modulated by host genetic factors. The aim of the current study was to determine whether selected single nucleotide polymorphisms (SNPs) unrelated to the human leukocyte antigen region or other immune pathways, including those associated with nonalcoholic fatty liver disease (NAFLD), may influence development, severity, or outcomes of drug‐induced liver injury (DILI). Thirteen variants previously associated with NAFLD and/or selected other liver diseases were tested in 832 Caucasian DILI cases and 10,397 Caucasian population controls. DILI cases were attributed to multiple agents (177 individual drugs), with 56 cases due to herbal/dietary supplement products. Allele frequencies were imputed from recent genome‐wide association studies and compared to those for European control samples from the Gnomad database. Significance was tested by linear regression or logistic regression, depending on the nature of the trait. Any variant that passed the Bonferroni threshold of P < 0.0004 ([Formula: see text]) was considered a significant association. None of the variants proved to be significantly associated with DILI as phenotype nor with any of the selected severity traits. Among the variants studied, rs1421085, found in the fat mass and obesity associated (FTO) gene, showed a marginal protective effect (odds ratio, 0.8; 95% confidence interval, 0.77‐0.95; P = 0.005). None of the genetic polymorphisms tested were significantly associated with the risk of development, severity, or outcome of DILI. Conclusion: SNPs implicated in common liver diseases, such as NAFLD, do not play a substantial role in DILI pathogenesis across agents. It remains possible that these variants could be involved with DILI due to single agents, but this will require the evaluation of larger numbers of bona fide cases. John Wiley and Sons Inc. 2019-06-06 /pmc/articles/PMC6671782/ /pubmed/31388624 http://dx.doi.org/10.1002/hep4.1382 Text en © 2019 The Authors. Hepatology Communications published by Wiley Periodicals, Inc., on behalf of the American Association for the Study of Liver Diseases. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Bonkovsky, Herbert L. Severson, Tyler Nicoletti, Paola Barnhart, Huiman Serrano, Jose Chalasani, Naga Fontana, Robert J. Watkins, Paul B. Navarro, Victor Stolz, Andrew Daly, Ann K. Aithal, Guruparasad P. Odin, Joseph Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title | Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title_full | Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title_fullStr | Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title_full_unstemmed | Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title_short | Genetic Polymorphisms Implicated in Nonalcoholic Liver Disease or Selected Other Disorders Have No Influence on Drug‐Induced Liver Injury |
title_sort | genetic polymorphisms implicated in nonalcoholic liver disease or selected other disorders have no influence on drug‐induced liver injury |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6671782/ https://www.ncbi.nlm.nih.gov/pubmed/31388624 http://dx.doi.org/10.1002/hep4.1382 |
work_keys_str_mv | AT bonkovskyherbertl geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT seversontyler geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT nicolettipaola geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT barnharthuiman geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT serranojose geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT chalasaninaga geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT fontanarobertj geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT watkinspaulb geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT navarrovictor geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT stolzandrew geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT dalyannk geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT aithalguruparasadp geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT odinjoseph geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury AT geneticpolymorphismsimplicatedinnonalcoholicliverdiseaseorselectedotherdisordershavenoinfluenceondruginducedliverinjury |