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Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039

Microalgal harvesting and dewatering are the main bottlenecks that need to be overcome to tap the potential of microalgae for production of valuable compounds. Water surface-floating microalgae form robust biofilms, float on the water surface along with gas bubbles entrapped under the biofilms, and...

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Autores principales: Maeda, Yoshiaki, Nojima, Daisuke, Sakurai, Miki, Nomaguchi, Tatsuhiro, Ichikawa, Momoko, Ishizuka, Yuki, Tanaka, Tsuyoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6671960/
https://www.ncbi.nlm.nih.gov/pubmed/31371830
http://dx.doi.org/10.1038/s41598-019-47612-8
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author Maeda, Yoshiaki
Nojima, Daisuke
Sakurai, Miki
Nomaguchi, Tatsuhiro
Ichikawa, Momoko
Ishizuka, Yuki
Tanaka, Tsuyoshi
author_facet Maeda, Yoshiaki
Nojima, Daisuke
Sakurai, Miki
Nomaguchi, Tatsuhiro
Ichikawa, Momoko
Ishizuka, Yuki
Tanaka, Tsuyoshi
author_sort Maeda, Yoshiaki
collection PubMed
description Microalgal harvesting and dewatering are the main bottlenecks that need to be overcome to tap the potential of microalgae for production of valuable compounds. Water surface-floating microalgae form robust biofilms, float on the water surface along with gas bubbles entrapped under the biofilms, and have great potential to overcome these bottlenecks. However, little is known about the molecular mechanisms involved in the water surface-floating phenotype. In the present study, we analysed the genome sequence of a water surface-floating microalga Chlorococcum sp. FFG039, with a next generation sequencing technique to elucidate the underlying mechanisms. Comparative genomics study with Chlorococcum sp. FFG039 and other non-floating green microalgae revealed some of the unique gene families belonging to this floating microalga, which may be involved in biofilm formation. Furthermore, genetic transformation of this microalga was achieved with an electroporation method. The genome information and transformation techniques presented in this study will be useful to obtain molecular insights into the water surface-floating phenotype of Chlorococcum sp. FFG039.
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spelling pubmed-66719602019-08-07 Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039 Maeda, Yoshiaki Nojima, Daisuke Sakurai, Miki Nomaguchi, Tatsuhiro Ichikawa, Momoko Ishizuka, Yuki Tanaka, Tsuyoshi Sci Rep Article Microalgal harvesting and dewatering are the main bottlenecks that need to be overcome to tap the potential of microalgae for production of valuable compounds. Water surface-floating microalgae form robust biofilms, float on the water surface along with gas bubbles entrapped under the biofilms, and have great potential to overcome these bottlenecks. However, little is known about the molecular mechanisms involved in the water surface-floating phenotype. In the present study, we analysed the genome sequence of a water surface-floating microalga Chlorococcum sp. FFG039, with a next generation sequencing technique to elucidate the underlying mechanisms. Comparative genomics study with Chlorococcum sp. FFG039 and other non-floating green microalgae revealed some of the unique gene families belonging to this floating microalga, which may be involved in biofilm formation. Furthermore, genetic transformation of this microalga was achieved with an electroporation method. The genome information and transformation techniques presented in this study will be useful to obtain molecular insights into the water surface-floating phenotype of Chlorococcum sp. FFG039. Nature Publishing Group UK 2019-08-01 /pmc/articles/PMC6671960/ /pubmed/31371830 http://dx.doi.org/10.1038/s41598-019-47612-8 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Maeda, Yoshiaki
Nojima, Daisuke
Sakurai, Miki
Nomaguchi, Tatsuhiro
Ichikawa, Momoko
Ishizuka, Yuki
Tanaka, Tsuyoshi
Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title_full Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title_fullStr Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title_full_unstemmed Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title_short Genome analysis and genetic transformation of a water surface-floating microalga Chlorococcum sp. FFG039
title_sort genome analysis and genetic transformation of a water surface-floating microalga chlorococcum sp. ffg039
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6671960/
https://www.ncbi.nlm.nih.gov/pubmed/31371830
http://dx.doi.org/10.1038/s41598-019-47612-8
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