Cargando…

Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis

The rates and biological significance of somatic mutations have long been a subject of debate. Somatic mutations in plants are expected to accumulate with vegetative growth and time, yet rates of somatic mutations are unknown for conifers, which can reach exceptional sizes and ages. We investigated...

Descripción completa

Detalles Bibliográficos
Autores principales: Hanlon, Vincent C. T., Otto, Sarah P., Aitken, Sally N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6675141/
https://www.ncbi.nlm.nih.gov/pubmed/31388445
http://dx.doi.org/10.1002/evl3.121
_version_ 1783440625157275648
author Hanlon, Vincent C. T.
Otto, Sarah P.
Aitken, Sally N.
author_facet Hanlon, Vincent C. T.
Otto, Sarah P.
Aitken, Sally N.
author_sort Hanlon, Vincent C. T.
collection PubMed
description The rates and biological significance of somatic mutations have long been a subject of debate. Somatic mutations in plants are expected to accumulate with vegetative growth and time, yet rates of somatic mutations are unknown for conifers, which can reach exceptional sizes and ages. We investigated somatic mutation rates in the conifer Sitka spruce (Picea sitchensis (Bong.) Carr.) by analyzing a total of 276 Gb of nuclear DNA from the tops and bottoms of 20 old‐growth trees averaging 76 m in height. We estimate a somatic base substitution rate of 2.7 × 10(−8) per base pair within a generation. To date, this is one of the highest estimated per‐generation rates of mutation among eukaryotes, indicating that somatic mutations contribute substantially to the total per‐generation mutation rate in conifers. Nevertheless, as the sampled trees are centuries old, the per‐year rate is low in comparison with nontree taxa. We argue that although somatic mutations raise genetic load in conifers, they generate important genetic variation and enable selection both among cell lineages within individual trees and among offspring.
format Online
Article
Text
id pubmed-6675141
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-66751412019-08-06 Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis Hanlon, Vincent C. T. Otto, Sarah P. Aitken, Sally N. Evol Lett Letters The rates and biological significance of somatic mutations have long been a subject of debate. Somatic mutations in plants are expected to accumulate with vegetative growth and time, yet rates of somatic mutations are unknown for conifers, which can reach exceptional sizes and ages. We investigated somatic mutation rates in the conifer Sitka spruce (Picea sitchensis (Bong.) Carr.) by analyzing a total of 276 Gb of nuclear DNA from the tops and bottoms of 20 old‐growth trees averaging 76 m in height. We estimate a somatic base substitution rate of 2.7 × 10(−8) per base pair within a generation. To date, this is one of the highest estimated per‐generation rates of mutation among eukaryotes, indicating that somatic mutations contribute substantially to the total per‐generation mutation rate in conifers. Nevertheless, as the sampled trees are centuries old, the per‐year rate is low in comparison with nontree taxa. We argue that although somatic mutations raise genetic load in conifers, they generate important genetic variation and enable selection both among cell lineages within individual trees and among offspring. John Wiley and Sons Inc. 2019-06-10 /pmc/articles/PMC6675141/ /pubmed/31388445 http://dx.doi.org/10.1002/evl3.121 Text en © 2019 The Author(s). Evolution Letters published by Wiley Periodicals, Inc. on behalf of Society for the Study of Evolution (SSE) and European Society for Evolutionary Biology (ESEB). This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Letters
Hanlon, Vincent C. T.
Otto, Sarah P.
Aitken, Sally N.
Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title_full Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title_fullStr Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title_full_unstemmed Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title_short Somatic mutations substantially increase the per‐generation mutation rate in the conifer Picea sitchensis
title_sort somatic mutations substantially increase the per‐generation mutation rate in the conifer picea sitchensis
topic Letters
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6675141/
https://www.ncbi.nlm.nih.gov/pubmed/31388445
http://dx.doi.org/10.1002/evl3.121
work_keys_str_mv AT hanlonvincentct somaticmutationssubstantiallyincreasethepergenerationmutationrateintheconiferpiceasitchensis
AT ottosarahp somaticmutationssubstantiallyincreasethepergenerationmutationrateintheconiferpiceasitchensis
AT aitkensallyn somaticmutationssubstantiallyincreasethepergenerationmutationrateintheconiferpiceasitchensis