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Significant epitranscriptomes in heterogeneous cancer

Precision medicine places significant emphasis on techniques for the identification of DNA mutations and gene expression by deep sequencing of gene panels to obtain medical data. However, other diverse information that is not easily readable using bioinformatics, including RNA modifications, has eme...

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Detalles Bibliográficos
Autores principales: Konno, Masamitsu, Taniguchi, Masateru, Ishii, Hideshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6676114/
https://www.ncbi.nlm.nih.gov/pubmed/31187550
http://dx.doi.org/10.1111/cas.14095
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author Konno, Masamitsu
Taniguchi, Masateru
Ishii, Hideshi
author_facet Konno, Masamitsu
Taniguchi, Masateru
Ishii, Hideshi
author_sort Konno, Masamitsu
collection PubMed
description Precision medicine places significant emphasis on techniques for the identification of DNA mutations and gene expression by deep sequencing of gene panels to obtain medical data. However, other diverse information that is not easily readable using bioinformatics, including RNA modifications, has emerged as a novel diagnostic and innovative therapy owing to its multifunctional aspects. It is suggested that this breakthrough innovation might open new avenues for the elucidation of uncharacterized cancer cellular functions to develop more precise medical applications. The functional characteristics and regulatory mechanisms of RNA modifications, ie, the epitranscriptome (ETR), which reflects RNA metabolism, remains unclear, mainly due to detection methods being limited. Recent studies have revealed that N6‐methyl adenosine, the most common modification in mRNA in eukaryotes, is affected in various types of cancer and, in some cases, cancer stem cells, but also affects cellular responses to viral infections. The ETR can control cancer cell fate through mRNA splicing, stability, nuclear export, and translation. Here we report on the recent progress of ETR detection methods, and biological findings regarding the significance of ETR in cancer precision medicine.
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spelling pubmed-66761142019-08-06 Significant epitranscriptomes in heterogeneous cancer Konno, Masamitsu Taniguchi, Masateru Ishii, Hideshi Cancer Sci Review Articles Precision medicine places significant emphasis on techniques for the identification of DNA mutations and gene expression by deep sequencing of gene panels to obtain medical data. However, other diverse information that is not easily readable using bioinformatics, including RNA modifications, has emerged as a novel diagnostic and innovative therapy owing to its multifunctional aspects. It is suggested that this breakthrough innovation might open new avenues for the elucidation of uncharacterized cancer cellular functions to develop more precise medical applications. The functional characteristics and regulatory mechanisms of RNA modifications, ie, the epitranscriptome (ETR), which reflects RNA metabolism, remains unclear, mainly due to detection methods being limited. Recent studies have revealed that N6‐methyl adenosine, the most common modification in mRNA in eukaryotes, is affected in various types of cancer and, in some cases, cancer stem cells, but also affects cellular responses to viral infections. The ETR can control cancer cell fate through mRNA splicing, stability, nuclear export, and translation. Here we report on the recent progress of ETR detection methods, and biological findings regarding the significance of ETR in cancer precision medicine. John Wiley and Sons Inc. 2019-08-02 2019-08 /pmc/articles/PMC6676114/ /pubmed/31187550 http://dx.doi.org/10.1111/cas.14095 Text en © 2019 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Review Articles
Konno, Masamitsu
Taniguchi, Masateru
Ishii, Hideshi
Significant epitranscriptomes in heterogeneous cancer
title Significant epitranscriptomes in heterogeneous cancer
title_full Significant epitranscriptomes in heterogeneous cancer
title_fullStr Significant epitranscriptomes in heterogeneous cancer
title_full_unstemmed Significant epitranscriptomes in heterogeneous cancer
title_short Significant epitranscriptomes in heterogeneous cancer
title_sort significant epitranscriptomes in heterogeneous cancer
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6676114/
https://www.ncbi.nlm.nih.gov/pubmed/31187550
http://dx.doi.org/10.1111/cas.14095
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