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Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks

Photoplethysmography (PPG)-based continuous heart rate monitoring is essential in a number of domains, e.g., for healthcare or fitness applications. Recently, methods based on time-frequency spectra emerged to address the challenges of motion artefact compensation. However, existing approaches are h...

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Autores principales: Reiss, Attila, Indlekofer, Ina, Schmidt, Philip, Van Laerhoven, Kristof
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6679242/
https://www.ncbi.nlm.nih.gov/pubmed/31336894
http://dx.doi.org/10.3390/s19143079
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author Reiss, Attila
Indlekofer, Ina
Schmidt, Philip
Van Laerhoven, Kristof
author_facet Reiss, Attila
Indlekofer, Ina
Schmidt, Philip
Van Laerhoven, Kristof
author_sort Reiss, Attila
collection PubMed
description Photoplethysmography (PPG)-based continuous heart rate monitoring is essential in a number of domains, e.g., for healthcare or fitness applications. Recently, methods based on time-frequency spectra emerged to address the challenges of motion artefact compensation. However, existing approaches are highly parametrised and optimised for specific scenarios of small, public datasets. We address this fragmentation by contributing research into the robustness and generalisation capabilities of PPG-based heart rate estimation approaches. First, we introduce a novel large-scale dataset (called PPG-DaLiA), including a wide range of activities performed under close to real-life conditions. Second, we extend a state-of-the-art algorithm, significantly improving its performance on several datasets. Third, we introduce deep learning to this domain, and investigate various convolutional neural network architectures. Our end-to-end learning approach takes the time-frequency spectra of synchronised PPG- and accelerometer-signals as input, and provides the estimated heart rate as output. Finally, we compare the novel deep learning approach to classical methods, performing evaluation on four public datasets. We show that on large datasets the deep learning model significantly outperforms other methods: The mean absolute error could be reduced by [Formula: see text] on the new dataset PPG-DaLiA, and by [Formula: see text] on the dataset WESAD.
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spelling pubmed-66792422019-08-19 Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks Reiss, Attila Indlekofer, Ina Schmidt, Philip Van Laerhoven, Kristof Sensors (Basel) Article Photoplethysmography (PPG)-based continuous heart rate monitoring is essential in a number of domains, e.g., for healthcare or fitness applications. Recently, methods based on time-frequency spectra emerged to address the challenges of motion artefact compensation. However, existing approaches are highly parametrised and optimised for specific scenarios of small, public datasets. We address this fragmentation by contributing research into the robustness and generalisation capabilities of PPG-based heart rate estimation approaches. First, we introduce a novel large-scale dataset (called PPG-DaLiA), including a wide range of activities performed under close to real-life conditions. Second, we extend a state-of-the-art algorithm, significantly improving its performance on several datasets. Third, we introduce deep learning to this domain, and investigate various convolutional neural network architectures. Our end-to-end learning approach takes the time-frequency spectra of synchronised PPG- and accelerometer-signals as input, and provides the estimated heart rate as output. Finally, we compare the novel deep learning approach to classical methods, performing evaluation on four public datasets. We show that on large datasets the deep learning model significantly outperforms other methods: The mean absolute error could be reduced by [Formula: see text] on the new dataset PPG-DaLiA, and by [Formula: see text] on the dataset WESAD. MDPI 2019-07-12 /pmc/articles/PMC6679242/ /pubmed/31336894 http://dx.doi.org/10.3390/s19143079 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Reiss, Attila
Indlekofer, Ina
Schmidt, Philip
Van Laerhoven, Kristof
Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title_full Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title_fullStr Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title_full_unstemmed Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title_short Deep PPG: Large-Scale Heart Rate Estimation with Convolutional Neural Networks
title_sort deep ppg: large-scale heart rate estimation with convolutional neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6679242/
https://www.ncbi.nlm.nih.gov/pubmed/31336894
http://dx.doi.org/10.3390/s19143079
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