Cargando…

Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform

Lab-on-a-disc (LOD) has emerged as a promising candidate for a point-of-care testing (POCT) device because it can effectively integrate complex fluid manipulation steps using multiple layers of polymeric substrates. However, it is still highly challenging to design and fabricate temperature measurem...

Descripción completa

Detalles Bibliográficos
Autores principales: Lim, Da Ye Seul, Seo, Moo-Jung, Yoo, Jae Chern
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6679502/
https://www.ncbi.nlm.nih.gov/pubmed/31330863
http://dx.doi.org/10.3390/s19143207
_version_ 1783441349941395456
author Lim, Da Ye Seul
Seo, Moo-Jung
Yoo, Jae Chern
author_facet Lim, Da Ye Seul
Seo, Moo-Jung
Yoo, Jae Chern
author_sort Lim, Da Ye Seul
collection PubMed
description Lab-on-a-disc (LOD) has emerged as a promising candidate for a point-of-care testing (POCT) device because it can effectively integrate complex fluid manipulation steps using multiple layers of polymeric substrates. However, it is still highly challenging to design and fabricate temperature measurement and heating system in non-contact with the surface of LOD, which is a prerequisite to successful realization of DNA amplification especially with a rotatable disc. This study presents a Lab-on-a-disc (LOD)-based automatic loop-mediated isothermal amplification (LAMP) system, where a thermochromic coating (<~420 µm) was used to distantly measure the chamber’s temperature and a micro graphite film was integrated into the chamber to remotely absorb laser beam with super high efficiency. We used a deep learning network to more consistently analyze the product of LAMP than we could with the naked eye. Consequently, both temperature heating and measurement were carried out without a physical contact with the surface of LOD. The experimental results show that the proposed approach, which no previous work has attempted, was highly effective in realizing LAMP in LOD.
format Online
Article
Text
id pubmed-6679502
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-66795022019-08-19 Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform Lim, Da Ye Seul Seo, Moo-Jung Yoo, Jae Chern Sensors (Basel) Article Lab-on-a-disc (LOD) has emerged as a promising candidate for a point-of-care testing (POCT) device because it can effectively integrate complex fluid manipulation steps using multiple layers of polymeric substrates. However, it is still highly challenging to design and fabricate temperature measurement and heating system in non-contact with the surface of LOD, which is a prerequisite to successful realization of DNA amplification especially with a rotatable disc. This study presents a Lab-on-a-disc (LOD)-based automatic loop-mediated isothermal amplification (LAMP) system, where a thermochromic coating (<~420 µm) was used to distantly measure the chamber’s temperature and a micro graphite film was integrated into the chamber to remotely absorb laser beam with super high efficiency. We used a deep learning network to more consistently analyze the product of LAMP than we could with the naked eye. Consequently, both temperature heating and measurement were carried out without a physical contact with the surface of LOD. The experimental results show that the proposed approach, which no previous work has attempted, was highly effective in realizing LAMP in LOD. MDPI 2019-07-20 /pmc/articles/PMC6679502/ /pubmed/31330863 http://dx.doi.org/10.3390/s19143207 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lim, Da Ye Seul
Seo, Moo-Jung
Yoo, Jae Chern
Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title_full Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title_fullStr Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title_full_unstemmed Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title_short Optical Temperature Control Unit and Convolutional Neural Network for Colorimetric Detection of Loop-Mediated Isothermal Amplification on a Lab-On-A-Disc Platform
title_sort optical temperature control unit and convolutional neural network for colorimetric detection of loop-mediated isothermal amplification on a lab-on-a-disc platform
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6679502/
https://www.ncbi.nlm.nih.gov/pubmed/31330863
http://dx.doi.org/10.3390/s19143207
work_keys_str_mv AT limdayeseul opticaltemperaturecontrolunitandconvolutionalneuralnetworkforcolorimetricdetectionofloopmediatedisothermalamplificationonalabonadiscplatform
AT seomoojung opticaltemperaturecontrolunitandconvolutionalneuralnetworkforcolorimetricdetectionofloopmediatedisothermalamplificationonalabonadiscplatform
AT yoojaechern opticaltemperaturecontrolunitandconvolutionalneuralnetworkforcolorimetricdetectionofloopmediatedisothermalamplificationonalabonadiscplatform