Cargando…
Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6680405/ https://www.ncbi.nlm.nih.gov/pubmed/31269701 http://dx.doi.org/10.3390/metabo9070127 |
_version_ | 1783441491854622720 |
---|---|
author | Laíns, Inês Chung, Wonil Kelly, Rachel S. Gil, João Marques, Marco Barreto, Patrícia Murta, Joaquim N. Kim, Ivana K. Vavvas, Demetrios G. Miller, John B. Silva, Rufino Lasky-Su, Jessica Liang, Liming Miller, Joan W. Husain, Deeba |
author_facet | Laíns, Inês Chung, Wonil Kelly, Rachel S. Gil, João Marques, Marco Barreto, Patrícia Murta, Joaquim N. Kim, Ivana K. Vavvas, Demetrios G. Miller, John B. Silva, Rufino Lasky-Su, Jessica Liang, Liming Miller, Joan W. Husain, Deeba |
author_sort | Laíns, Inês |
collection | PubMed |
description | The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (n = 196) and Coimbra, Portugal (n = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) q-value: 4.1 × 10(−2)–1.8 × 10(−5)), and 67 across disease stages (FDR q-value: 4.5 × 10(−2)–1.7 × 10(−4)). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (p-value ≤ 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition. |
format | Online Article Text |
id | pubmed-6680405 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66804052019-08-09 Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts Laíns, Inês Chung, Wonil Kelly, Rachel S. Gil, João Marques, Marco Barreto, Patrícia Murta, Joaquim N. Kim, Ivana K. Vavvas, Demetrios G. Miller, John B. Silva, Rufino Lasky-Su, Jessica Liang, Liming Miller, Joan W. Husain, Deeba Metabolites Article The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (n = 196) and Coimbra, Portugal (n = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) q-value: 4.1 × 10(−2)–1.8 × 10(−5)), and 67 across disease stages (FDR q-value: 4.5 × 10(−2)–1.7 × 10(−4)). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (p-value ≤ 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition. MDPI 2019-07-02 /pmc/articles/PMC6680405/ /pubmed/31269701 http://dx.doi.org/10.3390/metabo9070127 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Laíns, Inês Chung, Wonil Kelly, Rachel S. Gil, João Marques, Marco Barreto, Patrícia Murta, Joaquim N. Kim, Ivana K. Vavvas, Demetrios G. Miller, John B. Silva, Rufino Lasky-Su, Jessica Liang, Liming Miller, Joan W. Husain, Deeba Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title | Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title_full | Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title_fullStr | Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title_full_unstemmed | Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title_short | Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts |
title_sort | human plasma metabolomics in age-related macular degeneration: meta-analysis of two cohorts |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6680405/ https://www.ncbi.nlm.nih.gov/pubmed/31269701 http://dx.doi.org/10.3390/metabo9070127 |
work_keys_str_mv | AT lainsines humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT chungwonil humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT kellyrachels humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT giljoao humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT marquesmarco humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT barretopatricia humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT murtajoaquimn humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT kimivanak humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT vavvasdemetriosg humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT millerjohnb humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT silvarufino humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT laskysujessica humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT liangliming humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT millerjoanw humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts AT husaindeeba humanplasmametabolomicsinagerelatedmaculardegenerationmetaanalysisoftwocohorts |