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Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers

The 9p21.3 chromosomal region is a marker of the risk of cardiovascular diseases. The aim of this study was to analyze single-nucleotide polymorphism rs1333049 (chr9:22125504) in the population of Western Siberia (Russia) and possible associations with clinical and biochemical parameters. The popula...

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Autores principales: Shakhtshneider, Elena, Orlov, Pavel, Semaev, Sergey, Ivanoshchuk, Dinara, Malyutina, Sofia, Gafarov, Valery, Ragino, Yuliya, Voevoda, Mikhail
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681349/
https://www.ncbi.nlm.nih.gov/pubmed/31330999
http://dx.doi.org/10.3390/biom9070290
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author Shakhtshneider, Elena
Orlov, Pavel
Semaev, Sergey
Ivanoshchuk, Dinara
Malyutina, Sofia
Gafarov, Valery
Ragino, Yuliya
Voevoda, Mikhail
author_facet Shakhtshneider, Elena
Orlov, Pavel
Semaev, Sergey
Ivanoshchuk, Dinara
Malyutina, Sofia
Gafarov, Valery
Ragino, Yuliya
Voevoda, Mikhail
author_sort Shakhtshneider, Elena
collection PubMed
description The 9p21.3 chromosomal region is a marker of the risk of cardiovascular diseases. The aim of this study was to analyze single-nucleotide polymorphism rs1333049 (chr9:22125504) in the population of Western Siberia (Russia) and possible associations with clinical and biochemical parameters. The population included in the analyses was selected from a sample surveyed within the framework of the Health, Alcohol and Psychosocial Factors In Eastern Europe (HAPIEE) study (9360 participants, >90% white, aged 45–69, males: 50%). In total, 2729 randomly selected patients were included. Plasma lipid levels were determined by standard enzymatic assays. Rs1333049 was analyzed by RT-PCR (BioLabMix, Russia). Frequencies of rs1333049 genotypes C/C (homozygote), C/G (heterozygote), and G/G were 0.22, 0.51, and 0.27 in this population. The Allele G frequency was 0.53. We found an association of allele G with total cholesterol and low-density lipoprotein cholesterol levels among male participants (p = 0.004 and p = 0.002, respectively). Allele C was significantly associated with the risk of myocardial infarction among the male participants (odds ratio 1.96, 95% confidence interval 1.14–3.38, p =  0.017) and the study population (odds ratio 1.83, 95% confidence interval 1.23–2.72, p  =  0.004). Thus, rs1333049 is associated with myocardial infarction in the white population of Western Siberia (Russia).
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spelling pubmed-66813492019-08-09 Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers Shakhtshneider, Elena Orlov, Pavel Semaev, Sergey Ivanoshchuk, Dinara Malyutina, Sofia Gafarov, Valery Ragino, Yuliya Voevoda, Mikhail Biomolecules Article The 9p21.3 chromosomal region is a marker of the risk of cardiovascular diseases. The aim of this study was to analyze single-nucleotide polymorphism rs1333049 (chr9:22125504) in the population of Western Siberia (Russia) and possible associations with clinical and biochemical parameters. The population included in the analyses was selected from a sample surveyed within the framework of the Health, Alcohol and Psychosocial Factors In Eastern Europe (HAPIEE) study (9360 participants, >90% white, aged 45–69, males: 50%). In total, 2729 randomly selected patients were included. Plasma lipid levels were determined by standard enzymatic assays. Rs1333049 was analyzed by RT-PCR (BioLabMix, Russia). Frequencies of rs1333049 genotypes C/C (homozygote), C/G (heterozygote), and G/G were 0.22, 0.51, and 0.27 in this population. The Allele G frequency was 0.53. We found an association of allele G with total cholesterol and low-density lipoprotein cholesterol levels among male participants (p = 0.004 and p = 0.002, respectively). Allele C was significantly associated with the risk of myocardial infarction among the male participants (odds ratio 1.96, 95% confidence interval 1.14–3.38, p =  0.017) and the study population (odds ratio 1.83, 95% confidence interval 1.23–2.72, p  =  0.004). Thus, rs1333049 is associated with myocardial infarction in the white population of Western Siberia (Russia). MDPI 2019-07-19 /pmc/articles/PMC6681349/ /pubmed/31330999 http://dx.doi.org/10.3390/biom9070290 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shakhtshneider, Elena
Orlov, Pavel
Semaev, Sergey
Ivanoshchuk, Dinara
Malyutina, Sofia
Gafarov, Valery
Ragino, Yuliya
Voevoda, Mikhail
Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title_full Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title_fullStr Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title_full_unstemmed Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title_short Analysis of Polymorphism rs1333049 (Located at 9P21.3) in the White Population of Western Siberia and Associations with Clinical and Biochemical Markers
title_sort analysis of polymorphism rs1333049 (located at 9p21.3) in the white population of western siberia and associations with clinical and biochemical markers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681349/
https://www.ncbi.nlm.nih.gov/pubmed/31330999
http://dx.doi.org/10.3390/biom9070290
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