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LinearFold: linear-time approximate RNA folding by 5'-to-3' dynamic programming and beam search
MOTIVATION: Predicting the secondary structure of an ribonucleic acid (RNA) sequence is useful in many applications. Existing algorithms [based on dynamic programming] suffer from a major limitation: their runtimes scale cubically with the RNA length, and this slowness limits their use in genome-wid...
| Autores principales: | , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2019
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681470/ https://www.ncbi.nlm.nih.gov/pubmed/31510672 http://dx.doi.org/10.1093/bioinformatics/btz375 |