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Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging

Fabrication of a spherical multi-compartment MRI phantom is demonstrated that can be used to validate magnetic resonance (MR)-based susceptibility imaging reconstruction. The phantom consists of a 10 cm diameter gelatin sphere that encloses multiple smaller gelatin spheres doped with different conce...

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Autores principales: Kim, Jun-Ho, Kim, Jung-Hyun, Lee, So-Hee, Park, Jinhyoung, Lee, Seung-Kyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681938/
https://www.ncbi.nlm.nih.gov/pubmed/31381587
http://dx.doi.org/10.1371/journal.pone.0220639
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author Kim, Jun-Ho
Kim, Jung-Hyun
Lee, So-Hee
Park, Jinhyoung
Lee, Seung-Kyun
author_facet Kim, Jun-Ho
Kim, Jung-Hyun
Lee, So-Hee
Park, Jinhyoung
Lee, Seung-Kyun
author_sort Kim, Jun-Ho
collection PubMed
description Fabrication of a spherical multi-compartment MRI phantom is demonstrated that can be used to validate magnetic resonance (MR)-based susceptibility imaging reconstruction. The phantom consists of a 10 cm diameter gelatin sphere that encloses multiple smaller gelatin spheres doped with different concentrations of paramagnetic contrast agents. Compared to previous multi-compartment phantoms with cylindrical geometry, the phantom provides the following benefits: (1) no compartmental barrier materials are used that can introduce signal voids and spurious phase; (2) compartmental geometry is reproducible; (3) spherical susceptibility boundaries possess a ground-truth analytical phase solution for easy experimental validation; (4) spherical geometry of the overall phantom eliminates background phase due to air-phantom boundary in any scan orientation. The susceptibility of individual compartments can be controlled independently by doping. During fabrication, formalin cross-linking and water-proof surface coating effectively blocked water diffusion between the compartments to preserve the phantom's integrity. The spherical shapes were realized by molding the inner gel compartments in acrylic spherical shells, 3 cm in diameter, and constructing the whole phantom inside a larger acrylic shell. From gradient echo images obtained at 3T, we verified that the phantom produced phase images in agreement with the theoretical prediction. Factors that limit the agreement include: air bubbles trapped at the gel interfaces, imperfect magnet shimming, and the susceptibility of external materials such as the phantom support hardware. The phantom images were used to validate publicly available codes for quantitative susceptibility mapping. We believe that the proposed phantom can provide a useful testbed for validation of MR phase imaging and MR-based magnetic susceptibility reconstruction.
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spelling pubmed-66819382019-08-15 Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging Kim, Jun-Ho Kim, Jung-Hyun Lee, So-Hee Park, Jinhyoung Lee, Seung-Kyun PLoS One Research Article Fabrication of a spherical multi-compartment MRI phantom is demonstrated that can be used to validate magnetic resonance (MR)-based susceptibility imaging reconstruction. The phantom consists of a 10 cm diameter gelatin sphere that encloses multiple smaller gelatin spheres doped with different concentrations of paramagnetic contrast agents. Compared to previous multi-compartment phantoms with cylindrical geometry, the phantom provides the following benefits: (1) no compartmental barrier materials are used that can introduce signal voids and spurious phase; (2) compartmental geometry is reproducible; (3) spherical susceptibility boundaries possess a ground-truth analytical phase solution for easy experimental validation; (4) spherical geometry of the overall phantom eliminates background phase due to air-phantom boundary in any scan orientation. The susceptibility of individual compartments can be controlled independently by doping. During fabrication, formalin cross-linking and water-proof surface coating effectively blocked water diffusion between the compartments to preserve the phantom's integrity. The spherical shapes were realized by molding the inner gel compartments in acrylic spherical shells, 3 cm in diameter, and constructing the whole phantom inside a larger acrylic shell. From gradient echo images obtained at 3T, we verified that the phantom produced phase images in agreement with the theoretical prediction. Factors that limit the agreement include: air bubbles trapped at the gel interfaces, imperfect magnet shimming, and the susceptibility of external materials such as the phantom support hardware. The phantom images were used to validate publicly available codes for quantitative susceptibility mapping. We believe that the proposed phantom can provide a useful testbed for validation of MR phase imaging and MR-based magnetic susceptibility reconstruction. Public Library of Science 2019-08-05 /pmc/articles/PMC6681938/ /pubmed/31381587 http://dx.doi.org/10.1371/journal.pone.0220639 Text en © 2019 Kim et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kim, Jun-Ho
Kim, Jung-Hyun
Lee, So-Hee
Park, Jinhyoung
Lee, Seung-Kyun
Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title_full Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title_fullStr Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title_full_unstemmed Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title_short Fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
title_sort fabrication of a spherical inclusion phantom for validation of magnetic resonance-based magnetic susceptibility imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6681938/
https://www.ncbi.nlm.nih.gov/pubmed/31381587
http://dx.doi.org/10.1371/journal.pone.0220639
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