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Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy
PURPOSE: To determine whether machine learning assisted-texture analysis of multi-energy virtual monochromatic image (VMI) datasets from dual-energy CT (DECT) can be used to differentiate metastatic head and neck squamous cell carcinoma (HNSCC) lymph nodes from lymphoma, inflammatory, or normal lymp...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682309/ https://www.ncbi.nlm.nih.gov/pubmed/31406557 http://dx.doi.org/10.1016/j.csbj.2019.07.004 |
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author | Seidler, Matthew Forghani, Behzad Reinhold, Caroline Pérez-Lara, Almudena Romero-Sanchez, Griselda Muthukrishnan, Nikesh Wichmann, Julian L. Melki, Gabriel Yu, Eugene Forghani, Reza |
author_facet | Seidler, Matthew Forghani, Behzad Reinhold, Caroline Pérez-Lara, Almudena Romero-Sanchez, Griselda Muthukrishnan, Nikesh Wichmann, Julian L. Melki, Gabriel Yu, Eugene Forghani, Reza |
author_sort | Seidler, Matthew |
collection | PubMed |
description | PURPOSE: To determine whether machine learning assisted-texture analysis of multi-energy virtual monochromatic image (VMI) datasets from dual-energy CT (DECT) can be used to differentiate metastatic head and neck squamous cell carcinoma (HNSCC) lymph nodes from lymphoma, inflammatory, or normal lymph nodes. MATERIALS AND METHODS: A retrospective evaluation of 412 cervical nodes from 5 different patient groups (50 patients in total) having undergone DECT of the neck between 2013 and 2015 was performed: (1) HNSCC with pathology proven metastatic adenopathy, (2) HNSCC with pathology proven benign nodes (controls for (1)), (3) lymphoma, (4) inflammatory, and (5) normal nodes (controls for (3) and (4)). Texture analysis was performed with TexRAD® software using two independent sets of contours to assess the impact of inter-rater variation. Two machine learning algorithms (Random Forests (RF) and Gradient Boosting Machine (GBM)) were used with independent training and testing sets and determination of accuracy, sensitivity, specificity, PPV, NPV, and AUC. RESULTS: In the independent testing (prediction) sets, the accuracy for distinguishing different groups of pathologic nodes or normal nodes ranged between 80 and 95%. The models generated using texture data extracted from the independent contour sets had substantial to almost perfect agreement. The accuracy, sensitivity, specificity, PPV, and NPV for correctly classifying a lymph node as malignant (i.e. metastatic HNSCC or lymphoma) versus benign were 92%, 91%, 93%, 95%, 87%, respectively. CONCLUSION: Machine learning assisted-DECT texture analysis can help distinguish different nodal pathology and normal nodes with a high accuracy. |
format | Online Article Text |
id | pubmed-6682309 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-66823092019-08-12 Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy Seidler, Matthew Forghani, Behzad Reinhold, Caroline Pérez-Lara, Almudena Romero-Sanchez, Griselda Muthukrishnan, Nikesh Wichmann, Julian L. Melki, Gabriel Yu, Eugene Forghani, Reza Comput Struct Biotechnol J Research Article PURPOSE: To determine whether machine learning assisted-texture analysis of multi-energy virtual monochromatic image (VMI) datasets from dual-energy CT (DECT) can be used to differentiate metastatic head and neck squamous cell carcinoma (HNSCC) lymph nodes from lymphoma, inflammatory, or normal lymph nodes. MATERIALS AND METHODS: A retrospective evaluation of 412 cervical nodes from 5 different patient groups (50 patients in total) having undergone DECT of the neck between 2013 and 2015 was performed: (1) HNSCC with pathology proven metastatic adenopathy, (2) HNSCC with pathology proven benign nodes (controls for (1)), (3) lymphoma, (4) inflammatory, and (5) normal nodes (controls for (3) and (4)). Texture analysis was performed with TexRAD® software using two independent sets of contours to assess the impact of inter-rater variation. Two machine learning algorithms (Random Forests (RF) and Gradient Boosting Machine (GBM)) were used with independent training and testing sets and determination of accuracy, sensitivity, specificity, PPV, NPV, and AUC. RESULTS: In the independent testing (prediction) sets, the accuracy for distinguishing different groups of pathologic nodes or normal nodes ranged between 80 and 95%. The models generated using texture data extracted from the independent contour sets had substantial to almost perfect agreement. The accuracy, sensitivity, specificity, PPV, and NPV for correctly classifying a lymph node as malignant (i.e. metastatic HNSCC or lymphoma) versus benign were 92%, 91%, 93%, 95%, 87%, respectively. CONCLUSION: Machine learning assisted-DECT texture analysis can help distinguish different nodal pathology and normal nodes with a high accuracy. Research Network of Computational and Structural Biotechnology 2019-07-16 /pmc/articles/PMC6682309/ /pubmed/31406557 http://dx.doi.org/10.1016/j.csbj.2019.07.004 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Seidler, Matthew Forghani, Behzad Reinhold, Caroline Pérez-Lara, Almudena Romero-Sanchez, Griselda Muthukrishnan, Nikesh Wichmann, Julian L. Melki, Gabriel Yu, Eugene Forghani, Reza Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title | Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title_full | Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title_fullStr | Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title_full_unstemmed | Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title_short | Dual-Energy CT Texture Analysis With Machine Learning for the Evaluation and Characterization of Cervical Lymphadenopathy |
title_sort | dual-energy ct texture analysis with machine learning for the evaluation and characterization of cervical lymphadenopathy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682309/ https://www.ncbi.nlm.nih.gov/pubmed/31406557 http://dx.doi.org/10.1016/j.csbj.2019.07.004 |
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