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Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries

Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled compost...

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Autores principales: Ellilä, Simo, Bromann, Paul, Nyyssönen, Mari, Itävaara, Merja, Koivula, Anu, Paulin, Lars, Kruus, Kristiina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682842/
https://www.ncbi.nlm.nih.gov/pubmed/31385056
http://dx.doi.org/10.1186/s13568-019-0847-9
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author Ellilä, Simo
Bromann, Paul
Nyyssönen, Mari
Itävaara, Merja
Koivula, Anu
Paulin, Lars
Kruus, Kristiina
author_facet Ellilä, Simo
Bromann, Paul
Nyyssönen, Mari
Itävaara, Merja
Koivula, Anu
Paulin, Lars
Kruus, Kristiina
author_sort Ellilä, Simo
collection PubMed
description Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled composting of lignocellulosic materials was used to enrich the microbial population in lignocellulolytic organisms. DNA extracted from the compost samples was used to construct metagenomics libraries, which were screened for xylanase activity. In total, 40 clones exhibiting xylanase activity were identified and the thermostability of the discovered xylanases was assayed directly from the library clones. Five genes, including one belonging to the more rare family GH8, were selected for subcloning and the enzymes were expressed in recombinant form in E. coli. Preliminary characterization of the metagenome-derived xylanases revealed interesting properties of the novel enzymes, such as high thermostability and specific activity, and differences in hydrolysis profiles. One enzyme was found to perform better than a standard Trichoderma reesei xylanase in the hydrolysis of lignocellulose at elevated temperatures.
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spelling pubmed-66828422019-08-23 Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries Ellilä, Simo Bromann, Paul Nyyssönen, Mari Itävaara, Merja Koivula, Anu Paulin, Lars Kruus, Kristiina AMB Express Original Article Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled composting of lignocellulosic materials was used to enrich the microbial population in lignocellulolytic organisms. DNA extracted from the compost samples was used to construct metagenomics libraries, which were screened for xylanase activity. In total, 40 clones exhibiting xylanase activity were identified and the thermostability of the discovered xylanases was assayed directly from the library clones. Five genes, including one belonging to the more rare family GH8, were selected for subcloning and the enzymes were expressed in recombinant form in E. coli. Preliminary characterization of the metagenome-derived xylanases revealed interesting properties of the novel enzymes, such as high thermostability and specific activity, and differences in hydrolysis profiles. One enzyme was found to perform better than a standard Trichoderma reesei xylanase in the hydrolysis of lignocellulose at elevated temperatures. Springer Berlin Heidelberg 2019-08-05 /pmc/articles/PMC6682842/ /pubmed/31385056 http://dx.doi.org/10.1186/s13568-019-0847-9 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Ellilä, Simo
Bromann, Paul
Nyyssönen, Mari
Itävaara, Merja
Koivula, Anu
Paulin, Lars
Kruus, Kristiina
Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title_full Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title_fullStr Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title_full_unstemmed Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title_short Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
title_sort cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682842/
https://www.ncbi.nlm.nih.gov/pubmed/31385056
http://dx.doi.org/10.1186/s13568-019-0847-9
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