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Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries
Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled compost...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682842/ https://www.ncbi.nlm.nih.gov/pubmed/31385056 http://dx.doi.org/10.1186/s13568-019-0847-9 |
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author | Ellilä, Simo Bromann, Paul Nyyssönen, Mari Itävaara, Merja Koivula, Anu Paulin, Lars Kruus, Kristiina |
author_facet | Ellilä, Simo Bromann, Paul Nyyssönen, Mari Itävaara, Merja Koivula, Anu Paulin, Lars Kruus, Kristiina |
author_sort | Ellilä, Simo |
collection | PubMed |
description | Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled composting of lignocellulosic materials was used to enrich the microbial population in lignocellulolytic organisms. DNA extracted from the compost samples was used to construct metagenomics libraries, which were screened for xylanase activity. In total, 40 clones exhibiting xylanase activity were identified and the thermostability of the discovered xylanases was assayed directly from the library clones. Five genes, including one belonging to the more rare family GH8, were selected for subcloning and the enzymes were expressed in recombinant form in E. coli. Preliminary characterization of the metagenome-derived xylanases revealed interesting properties of the novel enzymes, such as high thermostability and specific activity, and differences in hydrolysis profiles. One enzyme was found to perform better than a standard Trichoderma reesei xylanase in the hydrolysis of lignocellulose at elevated temperatures. |
format | Online Article Text |
id | pubmed-6682842 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-66828422019-08-23 Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries Ellilä, Simo Bromann, Paul Nyyssönen, Mari Itävaara, Merja Koivula, Anu Paulin, Lars Kruus, Kristiina AMB Express Original Article Xylanases are in important class of industrial enzymes that are essential for the complete hydrolysis of lignocellulosic biomass into fermentable sugars. In the present study, we report the cloning of novel xylanases with interesting properties from compost metagenomics libraries. Controlled composting of lignocellulosic materials was used to enrich the microbial population in lignocellulolytic organisms. DNA extracted from the compost samples was used to construct metagenomics libraries, which were screened for xylanase activity. In total, 40 clones exhibiting xylanase activity were identified and the thermostability of the discovered xylanases was assayed directly from the library clones. Five genes, including one belonging to the more rare family GH8, were selected for subcloning and the enzymes were expressed in recombinant form in E. coli. Preliminary characterization of the metagenome-derived xylanases revealed interesting properties of the novel enzymes, such as high thermostability and specific activity, and differences in hydrolysis profiles. One enzyme was found to perform better than a standard Trichoderma reesei xylanase in the hydrolysis of lignocellulose at elevated temperatures. Springer Berlin Heidelberg 2019-08-05 /pmc/articles/PMC6682842/ /pubmed/31385056 http://dx.doi.org/10.1186/s13568-019-0847-9 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Article Ellilä, Simo Bromann, Paul Nyyssönen, Mari Itävaara, Merja Koivula, Anu Paulin, Lars Kruus, Kristiina Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title | Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title_full | Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title_fullStr | Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title_full_unstemmed | Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title_short | Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
title_sort | cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682842/ https://www.ncbi.nlm.nih.gov/pubmed/31385056 http://dx.doi.org/10.1186/s13568-019-0847-9 |
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