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Rapid prediction of NMR spectral properties with quantified uncertainty
Accurate calculation of specific spectral properties for NMR is an important step for molecular structure elucidation. Here we report the development of a novel machine learning technique for accurately predicting chemical shifts of both [Formula: see text] and [Formula: see text] nuclei which ex...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684566/ https://www.ncbi.nlm.nih.gov/pubmed/31388784 http://dx.doi.org/10.1186/s13321-019-0374-3 |
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author | Jonas, Eric Kuhn, Stefan |
author_facet | Jonas, Eric Kuhn, Stefan |
author_sort | Jonas, Eric |
collection | PubMed |
description | Accurate calculation of specific spectral properties for NMR is an important step for molecular structure elucidation. Here we report the development of a novel machine learning technique for accurately predicting chemical shifts of both [Formula: see text] and [Formula: see text] nuclei which exceeds DFT-accessible accuracy for [Formula: see text] and [Formula: see text] for a subset of nuclei, while being orders of magnitude more performant. Our method produces estimates of uncertainty, allowing for robust and confident predictions, and suggests future avenues for improved performance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13321-019-0374-3) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6684566 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-66845662019-08-13 Rapid prediction of NMR spectral properties with quantified uncertainty Jonas, Eric Kuhn, Stefan J Cheminform Research Article Accurate calculation of specific spectral properties for NMR is an important step for molecular structure elucidation. Here we report the development of a novel machine learning technique for accurately predicting chemical shifts of both [Formula: see text] and [Formula: see text] nuclei which exceeds DFT-accessible accuracy for [Formula: see text] and [Formula: see text] for a subset of nuclei, while being orders of magnitude more performant. Our method produces estimates of uncertainty, allowing for robust and confident predictions, and suggests future avenues for improved performance. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13321-019-0374-3) contains supplementary material, which is available to authorized users. Springer International Publishing 2019-08-06 /pmc/articles/PMC6684566/ /pubmed/31388784 http://dx.doi.org/10.1186/s13321-019-0374-3 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Jonas, Eric Kuhn, Stefan Rapid prediction of NMR spectral properties with quantified uncertainty |
title | Rapid prediction of NMR spectral properties with quantified uncertainty |
title_full | Rapid prediction of NMR spectral properties with quantified uncertainty |
title_fullStr | Rapid prediction of NMR spectral properties with quantified uncertainty |
title_full_unstemmed | Rapid prediction of NMR spectral properties with quantified uncertainty |
title_short | Rapid prediction of NMR spectral properties with quantified uncertainty |
title_sort | rapid prediction of nmr spectral properties with quantified uncertainty |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684566/ https://www.ncbi.nlm.nih.gov/pubmed/31388784 http://dx.doi.org/10.1186/s13321-019-0374-3 |
work_keys_str_mv | AT jonaseric rapidpredictionofnmrspectralpropertieswithquantifieduncertainty AT kuhnstefan rapidpredictionofnmrspectralpropertieswithquantifieduncertainty |