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Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram

The electroencephalogram (EEG) is a cornerstone of neurophysiological research and clinical neurology. Historically, the classification of EEG as showing normal physiological or abnormal pathological activity has been performed by expert visual review. The potential value of unbiased, automated EEG...

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Autores principales: Nejedly, P., Kremen, V., Sladky, V., Cimbalnik, J., Klimes, P., Plesinger, F., Viscor, I., Pail, M., Halamek, J., Brinkmann, B. H., Brazdil, M., Jurak, P., Worrell, G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684807/
https://www.ncbi.nlm.nih.gov/pubmed/31388101
http://dx.doi.org/10.1038/s41598-019-47854-6
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author Nejedly, P.
Kremen, V.
Sladky, V.
Cimbalnik, J.
Klimes, P.
Plesinger, F.
Viscor, I.
Pail, M.
Halamek, J.
Brinkmann, B. H.
Brazdil, M.
Jurak, P.
Worrell, G.
author_facet Nejedly, P.
Kremen, V.
Sladky, V.
Cimbalnik, J.
Klimes, P.
Plesinger, F.
Viscor, I.
Pail, M.
Halamek, J.
Brinkmann, B. H.
Brazdil, M.
Jurak, P.
Worrell, G.
author_sort Nejedly, P.
collection PubMed
description The electroencephalogram (EEG) is a cornerstone of neurophysiological research and clinical neurology. Historically, the classification of EEG as showing normal physiological or abnormal pathological activity has been performed by expert visual review. The potential value of unbiased, automated EEG classification has long been recognized, and in recent years the application of machine learning methods has received significant attention. A variety of solutions using convolutional neural networks (CNN) for EEG classification have emerged with impressive results. However, interpretation of CNN results and their connection with underlying basic electrophysiology has been unclear. This paper proposes a CNN architecture, which enables interpretation of intracranial EEG (iEEG) transients driving classification of brain activity as normal, pathological or artifactual. The goal is accomplished using CNN with long short-term memory (LSTM). We show that the method allows the visualization of iEEG graphoelements with the highest contribution to the final classification result using a classification heatmap and thus enables review of the raw iEEG data and interpret the decision of the model by electrophysiology means.
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spelling pubmed-66848072019-08-11 Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram Nejedly, P. Kremen, V. Sladky, V. Cimbalnik, J. Klimes, P. Plesinger, F. Viscor, I. Pail, M. Halamek, J. Brinkmann, B. H. Brazdil, M. Jurak, P. Worrell, G. Sci Rep Article The electroencephalogram (EEG) is a cornerstone of neurophysiological research and clinical neurology. Historically, the classification of EEG as showing normal physiological or abnormal pathological activity has been performed by expert visual review. The potential value of unbiased, automated EEG classification has long been recognized, and in recent years the application of machine learning methods has received significant attention. A variety of solutions using convolutional neural networks (CNN) for EEG classification have emerged with impressive results. However, interpretation of CNN results and their connection with underlying basic electrophysiology has been unclear. This paper proposes a CNN architecture, which enables interpretation of intracranial EEG (iEEG) transients driving classification of brain activity as normal, pathological or artifactual. The goal is accomplished using CNN with long short-term memory (LSTM). We show that the method allows the visualization of iEEG graphoelements with the highest contribution to the final classification result using a classification heatmap and thus enables review of the raw iEEG data and interpret the decision of the model by electrophysiology means. Nature Publishing Group UK 2019-08-06 /pmc/articles/PMC6684807/ /pubmed/31388101 http://dx.doi.org/10.1038/s41598-019-47854-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Nejedly, P.
Kremen, V.
Sladky, V.
Cimbalnik, J.
Klimes, P.
Plesinger, F.
Viscor, I.
Pail, M.
Halamek, J.
Brinkmann, B. H.
Brazdil, M.
Jurak, P.
Worrell, G.
Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title_full Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title_fullStr Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title_full_unstemmed Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title_short Exploiting Graphoelements and Convolutional Neural Networks with Long Short Term Memory for Classification of the Human Electroencephalogram
title_sort exploiting graphoelements and convolutional neural networks with long short term memory for classification of the human electroencephalogram
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6684807/
https://www.ncbi.nlm.nih.gov/pubmed/31388101
http://dx.doi.org/10.1038/s41598-019-47854-6
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