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Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability

Clostridium thermocellum is a potent cellulolytic bacterium. C. thermocellum strain PAL5, was derived from strain S14 that was isolated from bagasse paper sludge, possesses higher cellulose-degradation ability than representative strains ATCC27405 and DSM1313. In this work, we determined the draft g...

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Autores principales: Nakazono-Nagaoka, Eiko, Fujikawa, Takashi, Shikata, Ayumi, Tachaapaikoon, Chakrit, Waeonukul, Rattiya, Pason, Patthra, Ratanakhanokchai, Khanok, Kosugi, Akihiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6685675/
https://www.ncbi.nlm.nih.gov/pubmed/31406903
http://dx.doi.org/10.1016/j.dib.2019.104274
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author Nakazono-Nagaoka, Eiko
Fujikawa, Takashi
Shikata, Ayumi
Tachaapaikoon, Chakrit
Waeonukul, Rattiya
Pason, Patthra
Ratanakhanokchai, Khanok
Kosugi, Akihiko
author_facet Nakazono-Nagaoka, Eiko
Fujikawa, Takashi
Shikata, Ayumi
Tachaapaikoon, Chakrit
Waeonukul, Rattiya
Pason, Patthra
Ratanakhanokchai, Khanok
Kosugi, Akihiko
author_sort Nakazono-Nagaoka, Eiko
collection PubMed
description Clostridium thermocellum is a potent cellulolytic bacterium. C. thermocellum strain PAL5, was derived from strain S14 that was isolated from bagasse paper sludge, possesses higher cellulose-degradation ability than representative strains ATCC27405 and DSM1313. In this work, we determined the draft genome sequence of C. thermocellum PAL5. Genomic DNA was used for whole-genome sequencing using the Illumina HiSeq 2500. We obtained 215 contigs of >200 bp (N50, 78,366 bp; mean length, 17,378 bp). The assembled data were subjected to the National Center for Biotechnology Information (NCBI) Prokaryotic Genome Annotation Pipeline, and 3198 protein-coding sequences, 53 tRNA genes, and 4 rRNA genes were identified. The data are accessible at NCBI (the accession number SBHL00000000). Our data resource will facilitate further studies of efficient cellulose-degradation using C. thermocellum.
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spelling pubmed-66856752019-08-12 Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability Nakazono-Nagaoka, Eiko Fujikawa, Takashi Shikata, Ayumi Tachaapaikoon, Chakrit Waeonukul, Rattiya Pason, Patthra Ratanakhanokchai, Khanok Kosugi, Akihiko Data Brief Immunology and Microbiology Clostridium thermocellum is a potent cellulolytic bacterium. C. thermocellum strain PAL5, was derived from strain S14 that was isolated from bagasse paper sludge, possesses higher cellulose-degradation ability than representative strains ATCC27405 and DSM1313. In this work, we determined the draft genome sequence of C. thermocellum PAL5. Genomic DNA was used for whole-genome sequencing using the Illumina HiSeq 2500. We obtained 215 contigs of >200 bp (N50, 78,366 bp; mean length, 17,378 bp). The assembled data were subjected to the National Center for Biotechnology Information (NCBI) Prokaryotic Genome Annotation Pipeline, and 3198 protein-coding sequences, 53 tRNA genes, and 4 rRNA genes were identified. The data are accessible at NCBI (the accession number SBHL00000000). Our data resource will facilitate further studies of efficient cellulose-degradation using C. thermocellum. Elsevier 2019-07-15 /pmc/articles/PMC6685675/ /pubmed/31406903 http://dx.doi.org/10.1016/j.dib.2019.104274 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Immunology and Microbiology
Nakazono-Nagaoka, Eiko
Fujikawa, Takashi
Shikata, Ayumi
Tachaapaikoon, Chakrit
Waeonukul, Rattiya
Pason, Patthra
Ratanakhanokchai, Khanok
Kosugi, Akihiko
Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title_full Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title_fullStr Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title_full_unstemmed Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title_short Draft genome sequence data of Clostridium thermocellum PAL5 possessing high cellulose-degradation ability
title_sort draft genome sequence data of clostridium thermocellum pal5 possessing high cellulose-degradation ability
topic Immunology and Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6685675/
https://www.ncbi.nlm.nih.gov/pubmed/31406903
http://dx.doi.org/10.1016/j.dib.2019.104274
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