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Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees

1. Species distribution models (SDMs) provide useful information about potential presence or absence, and environmental conditions suitable for a species; and high‐resolution models across large extents are desirable. A primary feature of SDMs is the underlying spatial resolution, which can be chose...

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Autores principales: Peters, Matthew P., Iverson, Louis R., Prasad, Anantha M., Matthews, Stephen N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686326/
https://www.ncbi.nlm.nih.gov/pubmed/31410287
http://dx.doi.org/10.1002/ece3.5445
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author Peters, Matthew P.
Iverson, Louis R.
Prasad, Anantha M.
Matthews, Stephen N.
author_facet Peters, Matthew P.
Iverson, Louis R.
Prasad, Anantha M.
Matthews, Stephen N.
author_sort Peters, Matthew P.
collection PubMed
description 1. Species distribution models (SDMs) provide useful information about potential presence or absence, and environmental conditions suitable for a species; and high‐resolution models across large extents are desirable. A primary feature of SDMs is the underlying spatial resolution, which can be chosen for many reasons, though we propose that a hybrid lattice, in which grid cell sizes vary with the density of forest inventory plots, provides benefits over uniform grids. We examine how the spatial grain size affected overall model performance for the Random Forest‐based SDM, DISTRIB, which was updated with recent forest inventories, climate, and soil data, and used a hybrid lattice derived from inventory densities. 2. Modeled habitat suitability was compared between a uniform grid of 10 × 10 and a hybrid lattice of 10 × 10 and 20 × 20 km grids to assess potential improvements. The resulting DISTRIB‐II models for 125 eastern U.S. tree species provide information on individual habitat suitability that can be mapped and statistically analyzed to understand current and potential changes. 3. Model performance metrics were comparable among the hybrid lattice and 10‐km grids; however, the hybrid lattice models generally had higher overall model reliability scores and were likely more representative of the inventory data. 4. Our efforts to update DISTRIB models with current information aims to produce a more representative depiction of recent conditions by accounting for the spatial density of forest inventory data and using the latest climate data. Additionally, we developed an approach that leverages a hybrid lattice to maximize the spatial information within the models and recommend that similar modeling efforts be used to evaluate the spatial density of response and predictor data and derive a modeling grid that best represents the environment.
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spelling pubmed-66863262019-08-13 Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees Peters, Matthew P. Iverson, Louis R. Prasad, Anantha M. Matthews, Stephen N. Ecol Evol Original Research 1. Species distribution models (SDMs) provide useful information about potential presence or absence, and environmental conditions suitable for a species; and high‐resolution models across large extents are desirable. A primary feature of SDMs is the underlying spatial resolution, which can be chosen for many reasons, though we propose that a hybrid lattice, in which grid cell sizes vary with the density of forest inventory plots, provides benefits over uniform grids. We examine how the spatial grain size affected overall model performance for the Random Forest‐based SDM, DISTRIB, which was updated with recent forest inventories, climate, and soil data, and used a hybrid lattice derived from inventory densities. 2. Modeled habitat suitability was compared between a uniform grid of 10 × 10 and a hybrid lattice of 10 × 10 and 20 × 20 km grids to assess potential improvements. The resulting DISTRIB‐II models for 125 eastern U.S. tree species provide information on individual habitat suitability that can be mapped and statistically analyzed to understand current and potential changes. 3. Model performance metrics were comparable among the hybrid lattice and 10‐km grids; however, the hybrid lattice models generally had higher overall model reliability scores and were likely more representative of the inventory data. 4. Our efforts to update DISTRIB models with current information aims to produce a more representative depiction of recent conditions by accounting for the spatial density of forest inventory data and using the latest climate data. Additionally, we developed an approach that leverages a hybrid lattice to maximize the spatial information within the models and recommend that similar modeling efforts be used to evaluate the spatial density of response and predictor data and derive a modeling grid that best represents the environment. John Wiley and Sons Inc. 2019-07-17 /pmc/articles/PMC6686326/ /pubmed/31410287 http://dx.doi.org/10.1002/ece3.5445 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Peters, Matthew P.
Iverson, Louis R.
Prasad, Anantha M.
Matthews, Stephen N.
Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title_full Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title_fullStr Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title_full_unstemmed Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title_short Utilizing the density of inventory samples to define a hybrid lattice for species distribution models: DISTRIB‐II for 135 eastern U.S. trees
title_sort utilizing the density of inventory samples to define a hybrid lattice for species distribution models: distrib‐ii for 135 eastern u.s. trees
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686326/
https://www.ncbi.nlm.nih.gov/pubmed/31410287
http://dx.doi.org/10.1002/ece3.5445
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