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De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate

Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive...

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Autores principales: Liedtke, H. Christoph, Garrido, Jèssica Gómez, Esteve-Codina, Anna, Gut, Marta, Alioto, Tyler, Gomez-Mestre, Ivan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Genetics Society of America 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686947/
https://www.ncbi.nlm.nih.gov/pubmed/31217263
http://dx.doi.org/10.1534/g3.119.400389
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author Liedtke, H. Christoph
Garrido, Jèssica Gómez
Esteve-Codina, Anna
Gut, Marta
Alioto, Tyler
Gomez-Mestre, Ivan
author_facet Liedtke, H. Christoph
Garrido, Jèssica Gómez
Esteve-Codina, Anna
Gut, Marta
Alioto, Tyler
Gomez-Mestre, Ivan
author_sort Liedtke, H. Christoph
collection PubMed
description Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive to environmental conditions and can often alter their physiology, behavior and even morphology in response to the local conditions experienced, although we still know relatively little about the transcriptomic changes that enable such plasticity. Here we contribute the larval transcriptomes of two spadefoot toad species with divergent developmental rates and degree of developmental plasticity in response to pond drying.
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spelling pubmed-66869472019-08-11 De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate Liedtke, H. Christoph Garrido, Jèssica Gómez Esteve-Codina, Anna Gut, Marta Alioto, Tyler Gomez-Mestre, Ivan G3 (Bethesda) Investigations Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive to environmental conditions and can often alter their physiology, behavior and even morphology in response to the local conditions experienced, although we still know relatively little about the transcriptomic changes that enable such plasticity. Here we contribute the larval transcriptomes of two spadefoot toad species with divergent developmental rates and degree of developmental plasticity in response to pond drying. Genetics Society of America 2019-06-19 /pmc/articles/PMC6686947/ /pubmed/31217263 http://dx.doi.org/10.1534/g3.119.400389 Text en Copyright © 2019 Liedtke et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Investigations
Liedtke, H. Christoph
Garrido, Jèssica Gómez
Esteve-Codina, Anna
Gut, Marta
Alioto, Tyler
Gomez-Mestre, Ivan
De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title_full De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title_fullStr De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title_full_unstemmed De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title_short De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
title_sort de novo assembly and annotation of the larval transcriptome of two spadefoot toads widely divergent in developmental rate
topic Investigations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686947/
https://www.ncbi.nlm.nih.gov/pubmed/31217263
http://dx.doi.org/10.1534/g3.119.400389
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