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De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate
Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Genetics Society of America
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686947/ https://www.ncbi.nlm.nih.gov/pubmed/31217263 http://dx.doi.org/10.1534/g3.119.400389 |
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author | Liedtke, H. Christoph Garrido, Jèssica Gómez Esteve-Codina, Anna Gut, Marta Alioto, Tyler Gomez-Mestre, Ivan |
author_facet | Liedtke, H. Christoph Garrido, Jèssica Gómez Esteve-Codina, Anna Gut, Marta Alioto, Tyler Gomez-Mestre, Ivan |
author_sort | Liedtke, H. Christoph |
collection | PubMed |
description | Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive to environmental conditions and can often alter their physiology, behavior and even morphology in response to the local conditions experienced, although we still know relatively little about the transcriptomic changes that enable such plasticity. Here we contribute the larval transcriptomes of two spadefoot toad species with divergent developmental rates and degree of developmental plasticity in response to pond drying. |
format | Online Article Text |
id | pubmed-6686947 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Genetics Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-66869472019-08-11 De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate Liedtke, H. Christoph Garrido, Jèssica Gómez Esteve-Codina, Anna Gut, Marta Alioto, Tyler Gomez-Mestre, Ivan G3 (Bethesda) Investigations Amphibians are highly vulnerable and diverse vertebrates for which we still have modest genomic resources. Amphibian larvae are key components of continental wetlands, where they have strong influences on energy fluxes, nutrient cycling, and community structure. Amphibian larvae are highly sensitive to environmental conditions and can often alter their physiology, behavior and even morphology in response to the local conditions experienced, although we still know relatively little about the transcriptomic changes that enable such plasticity. Here we contribute the larval transcriptomes of two spadefoot toad species with divergent developmental rates and degree of developmental plasticity in response to pond drying. Genetics Society of America 2019-06-19 /pmc/articles/PMC6686947/ /pubmed/31217263 http://dx.doi.org/10.1534/g3.119.400389 Text en Copyright © 2019 Liedtke et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Investigations Liedtke, H. Christoph Garrido, Jèssica Gómez Esteve-Codina, Anna Gut, Marta Alioto, Tyler Gomez-Mestre, Ivan De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title | De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title_full | De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title_fullStr | De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title_full_unstemmed | De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title_short | De Novo Assembly and Annotation of the Larval Transcriptome of Two Spadefoot Toads Widely Divergent in Developmental Rate |
title_sort | de novo assembly and annotation of the larval transcriptome of two spadefoot toads widely divergent in developmental rate |
topic | Investigations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6686947/ https://www.ncbi.nlm.nih.gov/pubmed/31217263 http://dx.doi.org/10.1534/g3.119.400389 |
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