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Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal regio...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Genética
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687350/ https://www.ncbi.nlm.nih.gov/pubmed/30985858 http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173 |
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author | Corrêa, Thiago Feltes, Bruno César Riegel, Mariluce |
author_facet | Corrêa, Thiago Feltes, Bruno César Riegel, Mariluce |
author_sort | Corrêa, Thiago |
collection | PubMed |
description | Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal region 5p15.3–p15.2 associated with CdCs using systemsbiology. Data were extracted from cytogenomic findings from patients with CdCs. Based on clinical findings, molecular characterization of chromosomal rearrangements, and systems biology data, we explored possible genotype–phenotype correlations involving biological processes connected with CdCs candidate genes. We identified biological processes involving genes previously found to be associated with CdCs, such as TERT, SLC6A3, and CTDNND2, as well as novel candidate proteins with potential contributions to CdCs phenotypes, including CCT5, TPPP, MED10, ADCY2, MTRR, CEP72, NDUFS6, and MRPL36. Although further functional analyses of these proteins are required, we identified candidate proteins for the development of new multi-target genetic editing tools to study CdCs. Further research may confirm those that are directly involved in the development of CdCs phenotypes and improve our understanding of CdCs-associated molecular mechanisms. |
format | Online Article Text |
id | pubmed-6687350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Sociedade Brasileira de Genética |
record_format | MEDLINE/PubMed |
spelling | pubmed-66873502019-08-23 Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome Corrêa, Thiago Feltes, Bruno César Riegel, Mariluce Genet Mol Biol Articles Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal region 5p15.3–p15.2 associated with CdCs using systemsbiology. Data were extracted from cytogenomic findings from patients with CdCs. Based on clinical findings, molecular characterization of chromosomal rearrangements, and systems biology data, we explored possible genotype–phenotype correlations involving biological processes connected with CdCs candidate genes. We identified biological processes involving genes previously found to be associated with CdCs, such as TERT, SLC6A3, and CTDNND2, as well as novel candidate proteins with potential contributions to CdCs phenotypes, including CCT5, TPPP, MED10, ADCY2, MTRR, CEP72, NDUFS6, and MRPL36. Although further functional analyses of these proteins are required, we identified candidate proteins for the development of new multi-target genetic editing tools to study CdCs. Further research may confirm those that are directly involved in the development of CdCs phenotypes and improve our understanding of CdCs-associated molecular mechanisms. Sociedade Brasileira de Genética 2019-04-11 2019 /pmc/articles/PMC6687350/ /pubmed/30985858 http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173 Text en Copyright © 2019, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited. |
spellingShingle | Articles Corrêa, Thiago Feltes, Bruno César Riegel, Mariluce Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome |
title | Integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
title_full | Integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
title_fullStr | Integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
title_full_unstemmed | Integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
title_short | Integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
title_sort | integrated analysis of the critical region 5p15.3–p15.2 associated
with cri-du-chat syndrome |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687350/ https://www.ncbi.nlm.nih.gov/pubmed/30985858 http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173 |
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