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Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome

Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal regio...

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Autores principales: Corrêa, Thiago, Feltes, Bruno César, Riegel, Mariluce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687350/
https://www.ncbi.nlm.nih.gov/pubmed/30985858
http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173
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author Corrêa, Thiago
Feltes, Bruno César
Riegel, Mariluce
author_facet Corrêa, Thiago
Feltes, Bruno César
Riegel, Mariluce
author_sort Corrêa, Thiago
collection PubMed
description Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal region 5p15.3–p15.2 associated with CdCs using systemsbiology. Data were extracted from cytogenomic findings from patients with CdCs. Based on clinical findings, molecular characterization of chromosomal rearrangements, and systems biology data, we explored possible genotype–phenotype correlations involving biological processes connected with CdCs candidate genes. We identified biological processes involving genes previously found to be associated with CdCs, such as TERT, SLC6A3, and CTDNND2, as well as novel candidate proteins with potential contributions to CdCs phenotypes, including CCT5, TPPP, MED10, ADCY2, MTRR, CEP72, NDUFS6, and MRPL36. Although further functional analyses of these proteins are required, we identified candidate proteins for the development of new multi-target genetic editing tools to study CdCs. Further research may confirm those that are directly involved in the development of CdCs phenotypes and improve our understanding of CdCs-associated molecular mechanisms.
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spelling pubmed-66873502019-08-23 Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome Corrêa, Thiago Feltes, Bruno César Riegel, Mariluce Genet Mol Biol Articles Cri-du-chat syndrome (CdCs) is one of the most common contiguous gene syndromes, with an incidence of 1:15,000 to 1:50,000 live births. To better understand the etiology of CdCs at the molecular level, we investigated theprotein–protein interaction (PPI) network within the critical chromosomal region 5p15.3–p15.2 associated with CdCs using systemsbiology. Data were extracted from cytogenomic findings from patients with CdCs. Based on clinical findings, molecular characterization of chromosomal rearrangements, and systems biology data, we explored possible genotype–phenotype correlations involving biological processes connected with CdCs candidate genes. We identified biological processes involving genes previously found to be associated with CdCs, such as TERT, SLC6A3, and CTDNND2, as well as novel candidate proteins with potential contributions to CdCs phenotypes, including CCT5, TPPP, MED10, ADCY2, MTRR, CEP72, NDUFS6, and MRPL36. Although further functional analyses of these proteins are required, we identified candidate proteins for the development of new multi-target genetic editing tools to study CdCs. Further research may confirm those that are directly involved in the development of CdCs phenotypes and improve our understanding of CdCs-associated molecular mechanisms. Sociedade Brasileira de Genética 2019-04-11 2019 /pmc/articles/PMC6687350/ /pubmed/30985858 http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173 Text en Copyright © 2019, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Articles
Corrêa, Thiago
Feltes, Bruno César
Riegel, Mariluce
Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title_full Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title_fullStr Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title_full_unstemmed Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title_short Integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
title_sort integrated analysis of the critical region 5p15.3–p15.2 associated with cri-du-chat syndrome
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687350/
https://www.ncbi.nlm.nih.gov/pubmed/30985858
http://dx.doi.org/10.1590/1678-4685-GMB-2018-0173
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