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Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients
BACKGROUND: Primary ciliary dyskinesia (PCD) is a relatively rare autosomal recessive or X‐linked disorder affecting ciliary function. In the set of causative genes, however, predominant pathogenic variants remain unknown in Asia. METHOD: A diagnosis of PCD was made following a modern comprehensive...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687623/ https://www.ncbi.nlm.nih.gov/pubmed/31270959 http://dx.doi.org/10.1002/mgg3.838 |
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author | Morimoto, Kozo Hijikata, Minako Zariwala, Maimoona A. Nykamp, Keith Inaba, Atsushi Guo, Tz‐Chun Yamada, Hiroyuki Truty, Rebecca Sasaki, Yuka Ohta, Ken Kudoh, Shoji Leigh, Margaret W. Knowles, Michael R. Keicho, Naoto |
author_facet | Morimoto, Kozo Hijikata, Minako Zariwala, Maimoona A. Nykamp, Keith Inaba, Atsushi Guo, Tz‐Chun Yamada, Hiroyuki Truty, Rebecca Sasaki, Yuka Ohta, Ken Kudoh, Shoji Leigh, Margaret W. Knowles, Michael R. Keicho, Naoto |
author_sort | Morimoto, Kozo |
collection | PubMed |
description | BACKGROUND: Primary ciliary dyskinesia (PCD) is a relatively rare autosomal recessive or X‐linked disorder affecting ciliary function. In the set of causative genes, however, predominant pathogenic variants remain unknown in Asia. METHOD: A diagnosis of PCD was made following a modern comprehensive testing including genetic analysis; targeted resequencing for screening variants, and Sanger sequencing for determination of the breakpoints, with an additional review of databases to calculate the deletion frequency. A multiplexed PCR‐based detection method has also been developed. RESULTS: We ascertained a 50‐year‐old Japanese male who had been diagnosed with diffuse panbronchiolitis (DPB), but refractory to macrolide therapy. We reevaluated the case and identified a large homozygous deletion spanning exons 1 to 4 of the DRC1 and determined the breakpoints (NM_145038.4: c.1‐3952_540 + 1331del27748‐bp). In the PCD cohort at the University of North Carolina, we found a female PCD patient of Korean descent harboring the same homozygous deletion. From the Invitae testing cohort, we extracted four carriers of the same deletion among 965 Asian individuals, whereas no deletion was found in the 23,951 non‐Asians. CONCLUSION: We speculate that the DRC1 deletion is a recurrent or perhaps founder mutation in Asians. The simple PCR method could be a useful screening tool. |
format | Online Article Text |
id | pubmed-6687623 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-66876232019-08-14 Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients Morimoto, Kozo Hijikata, Minako Zariwala, Maimoona A. Nykamp, Keith Inaba, Atsushi Guo, Tz‐Chun Yamada, Hiroyuki Truty, Rebecca Sasaki, Yuka Ohta, Ken Kudoh, Shoji Leigh, Margaret W. Knowles, Michael R. Keicho, Naoto Mol Genet Genomic Med Original Articles BACKGROUND: Primary ciliary dyskinesia (PCD) is a relatively rare autosomal recessive or X‐linked disorder affecting ciliary function. In the set of causative genes, however, predominant pathogenic variants remain unknown in Asia. METHOD: A diagnosis of PCD was made following a modern comprehensive testing including genetic analysis; targeted resequencing for screening variants, and Sanger sequencing for determination of the breakpoints, with an additional review of databases to calculate the deletion frequency. A multiplexed PCR‐based detection method has also been developed. RESULTS: We ascertained a 50‐year‐old Japanese male who had been diagnosed with diffuse panbronchiolitis (DPB), but refractory to macrolide therapy. We reevaluated the case and identified a large homozygous deletion spanning exons 1 to 4 of the DRC1 and determined the breakpoints (NM_145038.4: c.1‐3952_540 + 1331del27748‐bp). In the PCD cohort at the University of North Carolina, we found a female PCD patient of Korean descent harboring the same homozygous deletion. From the Invitae testing cohort, we extracted four carriers of the same deletion among 965 Asian individuals, whereas no deletion was found in the 23,951 non‐Asians. CONCLUSION: We speculate that the DRC1 deletion is a recurrent or perhaps founder mutation in Asians. The simple PCR method could be a useful screening tool. John Wiley and Sons Inc. 2019-07-04 /pmc/articles/PMC6687623/ /pubmed/31270959 http://dx.doi.org/10.1002/mgg3.838 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Morimoto, Kozo Hijikata, Minako Zariwala, Maimoona A. Nykamp, Keith Inaba, Atsushi Guo, Tz‐Chun Yamada, Hiroyuki Truty, Rebecca Sasaki, Yuka Ohta, Ken Kudoh, Shoji Leigh, Margaret W. Knowles, Michael R. Keicho, Naoto Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title | Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title_full | Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title_fullStr | Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title_full_unstemmed | Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title_short | Recurring large deletion in DRC1 (CCDC164) identified as causing primary ciliary dyskinesia in two Asian patients |
title_sort | recurring large deletion in drc1 (ccdc164) identified as causing primary ciliary dyskinesia in two asian patients |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6687623/ https://www.ncbi.nlm.nih.gov/pubmed/31270959 http://dx.doi.org/10.1002/mgg3.838 |
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