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The bio.tools registry of software tools and data resources for the life sciences

Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue (https://bio.tools) of tools and databases that can be u...

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Autores principales: Ison, Jon, Ienasescu, Hans, Chmura, Piotr, Rydza, Emil, Ménager, Hervé, Kalaš, Matúš, Schwämmle, Veit, Grüning, Björn, Beard, Niall, Lopez, Rodrigo, Duvaud, Severine, Stockinger, Heinz, Persson, Bengt, Vařeková, Radka Svobodová, Raček, Tomáš, Vondrášek, Jiří, Peterson, Hedi, Salumets, Ahto, Jonassen, Inge, Hooft, Rob, Nyrönen, Tommi, Valencia, Alfonso, Capella, Salvador, Gelpí, Josep, Zambelli, Federico, Savakis, Babis, Leskošek, Brane, Rapacki, Kristoffer, Blanchet, Christophe, Jimenez, Rafael, Oliveira, Arlindo, Vriend, Gert, Collin, Olivier, van Helden, Jacques, Løngreen, Peter, Brunak, Søren
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6691543/
https://www.ncbi.nlm.nih.gov/pubmed/31405382
http://dx.doi.org/10.1186/s13059-019-1772-6
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author Ison, Jon
Ienasescu, Hans
Chmura, Piotr
Rydza, Emil
Ménager, Hervé
Kalaš, Matúš
Schwämmle, Veit
Grüning, Björn
Beard, Niall
Lopez, Rodrigo
Duvaud, Severine
Stockinger, Heinz
Persson, Bengt
Vařeková, Radka Svobodová
Raček, Tomáš
Vondrášek, Jiří
Peterson, Hedi
Salumets, Ahto
Jonassen, Inge
Hooft, Rob
Nyrönen, Tommi
Valencia, Alfonso
Capella, Salvador
Gelpí, Josep
Zambelli, Federico
Savakis, Babis
Leskošek, Brane
Rapacki, Kristoffer
Blanchet, Christophe
Jimenez, Rafael
Oliveira, Arlindo
Vriend, Gert
Collin, Olivier
van Helden, Jacques
Løngreen, Peter
Brunak, Søren
author_facet Ison, Jon
Ienasescu, Hans
Chmura, Piotr
Rydza, Emil
Ménager, Hervé
Kalaš, Matúš
Schwämmle, Veit
Grüning, Björn
Beard, Niall
Lopez, Rodrigo
Duvaud, Severine
Stockinger, Heinz
Persson, Bengt
Vařeková, Radka Svobodová
Raček, Tomáš
Vondrášek, Jiří
Peterson, Hedi
Salumets, Ahto
Jonassen, Inge
Hooft, Rob
Nyrönen, Tommi
Valencia, Alfonso
Capella, Salvador
Gelpí, Josep
Zambelli, Federico
Savakis, Babis
Leskošek, Brane
Rapacki, Kristoffer
Blanchet, Christophe
Jimenez, Rafael
Oliveira, Arlindo
Vriend, Gert
Collin, Olivier
van Helden, Jacques
Løngreen, Peter
Brunak, Søren
author_sort Ison, Jon
collection PubMed
description Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue (https://bio.tools) of tools and databases that can be used in these workflows. bio.tools not only lists where to find resources, but also provides a wide variety of practical information. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13059-019-1772-6) contains supplementary material, which is available to authorized users.
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spelling pubmed-66915432019-08-15 The bio.tools registry of software tools and data resources for the life sciences Ison, Jon Ienasescu, Hans Chmura, Piotr Rydza, Emil Ménager, Hervé Kalaš, Matúš Schwämmle, Veit Grüning, Björn Beard, Niall Lopez, Rodrigo Duvaud, Severine Stockinger, Heinz Persson, Bengt Vařeková, Radka Svobodová Raček, Tomáš Vondrášek, Jiří Peterson, Hedi Salumets, Ahto Jonassen, Inge Hooft, Rob Nyrönen, Tommi Valencia, Alfonso Capella, Salvador Gelpí, Josep Zambelli, Federico Savakis, Babis Leskošek, Brane Rapacki, Kristoffer Blanchet, Christophe Jimenez, Rafael Oliveira, Arlindo Vriend, Gert Collin, Olivier van Helden, Jacques Løngreen, Peter Brunak, Søren Genome Biol Open Letter Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue (https://bio.tools) of tools and databases that can be used in these workflows. bio.tools not only lists where to find resources, but also provides a wide variety of practical information. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13059-019-1772-6) contains supplementary material, which is available to authorized users. BioMed Central 2019-08-12 /pmc/articles/PMC6691543/ /pubmed/31405382 http://dx.doi.org/10.1186/s13059-019-1772-6 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Open Letter
Ison, Jon
Ienasescu, Hans
Chmura, Piotr
Rydza, Emil
Ménager, Hervé
Kalaš, Matúš
Schwämmle, Veit
Grüning, Björn
Beard, Niall
Lopez, Rodrigo
Duvaud, Severine
Stockinger, Heinz
Persson, Bengt
Vařeková, Radka Svobodová
Raček, Tomáš
Vondrášek, Jiří
Peterson, Hedi
Salumets, Ahto
Jonassen, Inge
Hooft, Rob
Nyrönen, Tommi
Valencia, Alfonso
Capella, Salvador
Gelpí, Josep
Zambelli, Federico
Savakis, Babis
Leskošek, Brane
Rapacki, Kristoffer
Blanchet, Christophe
Jimenez, Rafael
Oliveira, Arlindo
Vriend, Gert
Collin, Olivier
van Helden, Jacques
Løngreen, Peter
Brunak, Søren
The bio.tools registry of software tools and data resources for the life sciences
title The bio.tools registry of software tools and data resources for the life sciences
title_full The bio.tools registry of software tools and data resources for the life sciences
title_fullStr The bio.tools registry of software tools and data resources for the life sciences
title_full_unstemmed The bio.tools registry of software tools and data resources for the life sciences
title_short The bio.tools registry of software tools and data resources for the life sciences
title_sort bio.tools registry of software tools and data resources for the life sciences
topic Open Letter
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6691543/
https://www.ncbi.nlm.nih.gov/pubmed/31405382
http://dx.doi.org/10.1186/s13059-019-1772-6
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