Cargando…
Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis
BACKGROUND: Ultra-fast pseudo-alignment approaches are the tool of choice in transcript-level RNA sequencing (RNA-seq) analyses. Unfortunately, these methods couple the tasks of pseudo-alignment and transcript quantification. This coupling precludes the direct usage of pseudo-alignment to other expr...
Autores principales: | Gunady, Mohamed K, Mount, Stephen M, Corrada Bravo, Héctor |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6693274/ https://www.ncbi.nlm.nih.gov/pubmed/31409274 http://dx.doi.org/10.1186/s12859-019-2947-6 |
Ejemplares similares
-
The partitioned LASSO-patternsearch algorithm with application to gene expression data
por: Shi, Weiliang, et al.
Publicado: (2012) -
A framework for assessing 16S rRNA marker-gene survey data analysis methods using mixtures.
por: Olson, Nathan D., et al.
Publicado: (2020) -
A robust estimation of exon expression to identify alternative spliced genes applied to human tissues and cancer samples
por: Risueño, Alberto, et al.
Publicado: (2014) -
Gene Expression Signatures Based on Variability can Robustly Predict Tumor Progression and Prognosis
por: Dinalankara, Wikum, et al.
Publicado: (2015) -
BlindCall: ultra-fast base-calling of high-throughput sequencing data by blind deconvolution
por: Ye, Chengxi, et al.
Publicado: (2014)