Cargando…

Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation

Protein function depends critically on intrinsic internal dynamics, which is manifested in distinct ways, such as loop motions that regulate protein recognition and catalysis. Under physiological conditions, dynamic processes occur on a wide range of time scales from subpicoseconds to seconds. Commo...

Descripción completa

Detalles Bibliográficos
Autores principales: Xie, Mouzhe, Yu, Lei, Bruschweiler-Li, Lei, Xiang, Xinyao, Hansen, Alexandar L., Brüschweiler, Rafael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6693908/
https://www.ncbi.nlm.nih.gov/pubmed/31453342
http://dx.doi.org/10.1126/sciadv.aax5560
_version_ 1783443754066116608
author Xie, Mouzhe
Yu, Lei
Bruschweiler-Li, Lei
Xiang, Xinyao
Hansen, Alexandar L.
Brüschweiler, Rafael
author_facet Xie, Mouzhe
Yu, Lei
Bruschweiler-Li, Lei
Xiang, Xinyao
Hansen, Alexandar L.
Brüschweiler, Rafael
author_sort Xie, Mouzhe
collection PubMed
description Protein function depends critically on intrinsic internal dynamics, which is manifested in distinct ways, such as loop motions that regulate protein recognition and catalysis. Under physiological conditions, dynamic processes occur on a wide range of time scales from subpicoseconds to seconds. Commonly used NMR spin relaxation in solution provides valuable information on very fast and slow motions but is insensitive to the intermediate nanosecond to microsecond range that exceeds the protein tumbling correlation time. Presently, very little is known about the nature and functional role of these motions. It is demonstrated here how transverse spin relaxation becomes exquisitely sensitive to these motions at atomic resolution when studying proteins in the presence of nanoparticles. Application of this novel cross-disciplinary approach reveals large-scale dynamics of loops involved in functionally critical protein-protein interactions and protein-calcium ion recognition that were previously unobservable.
format Online
Article
Text
id pubmed-6693908
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher American Association for the Advancement of Science
record_format MEDLINE/PubMed
spelling pubmed-66939082019-08-26 Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation Xie, Mouzhe Yu, Lei Bruschweiler-Li, Lei Xiang, Xinyao Hansen, Alexandar L. Brüschweiler, Rafael Sci Adv Research Articles Protein function depends critically on intrinsic internal dynamics, which is manifested in distinct ways, such as loop motions that regulate protein recognition and catalysis. Under physiological conditions, dynamic processes occur on a wide range of time scales from subpicoseconds to seconds. Commonly used NMR spin relaxation in solution provides valuable information on very fast and slow motions but is insensitive to the intermediate nanosecond to microsecond range that exceeds the protein tumbling correlation time. Presently, very little is known about the nature and functional role of these motions. It is demonstrated here how transverse spin relaxation becomes exquisitely sensitive to these motions at atomic resolution when studying proteins in the presence of nanoparticles. Application of this novel cross-disciplinary approach reveals large-scale dynamics of loops involved in functionally critical protein-protein interactions and protein-calcium ion recognition that were previously unobservable. American Association for the Advancement of Science 2019-08-14 /pmc/articles/PMC6693908/ /pubmed/31453342 http://dx.doi.org/10.1126/sciadv.aax5560 Text en Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (http://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Research Articles
Xie, Mouzhe
Yu, Lei
Bruschweiler-Li, Lei
Xiang, Xinyao
Hansen, Alexandar L.
Brüschweiler, Rafael
Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title_full Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title_fullStr Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title_full_unstemmed Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title_short Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation
title_sort functional protein dynamics on uncharted time scales detected by nanoparticle-assisted nmr spin relaxation
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6693908/
https://www.ncbi.nlm.nih.gov/pubmed/31453342
http://dx.doi.org/10.1126/sciadv.aax5560
work_keys_str_mv AT xiemouzhe functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation
AT yulei functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation
AT bruschweilerlilei functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation
AT xiangxinyao functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation
AT hansenalexandarl functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation
AT bruschweilerrafael functionalproteindynamicsonunchartedtimescalesdetectedbynanoparticleassistednmrspinrelaxation