Cargando…

Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017

BACKGROUND: Dengue virus (DENV) infection is one of the biggest challenges for human health in the world. In addition, a secondary DENV infection sometimes causes dengue hemorrhagic fever (DHF), which frequently leads to death. For this reason, accurate diagnosis record management is useful for pred...

Descripción completa

Detalles Bibliográficos
Autores principales: Suzuki, Keita, Nakayama, Emi E., Saito, Akatsuki, Egawa, Akio, Sato, Tairyu, Phadungsombat, Juthamas, Rahim, Rummana, Hasan, Abu, Iwamoto, Hisahiko, Rahman, Mizanur, Shioda, Tatsuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6694664/
https://www.ncbi.nlm.nih.gov/pubmed/31416485
http://dx.doi.org/10.1186/s12985-019-1204-y
_version_ 1783443873988608000
author Suzuki, Keita
Nakayama, Emi E.
Saito, Akatsuki
Egawa, Akio
Sato, Tairyu
Phadungsombat, Juthamas
Rahim, Rummana
Hasan, Abu
Iwamoto, Hisahiko
Rahman, Mizanur
Shioda, Tatsuo
author_facet Suzuki, Keita
Nakayama, Emi E.
Saito, Akatsuki
Egawa, Akio
Sato, Tairyu
Phadungsombat, Juthamas
Rahim, Rummana
Hasan, Abu
Iwamoto, Hisahiko
Rahman, Mizanur
Shioda, Tatsuo
author_sort Suzuki, Keita
collection PubMed
description BACKGROUND: Dengue virus (DENV) infection is one of the biggest challenges for human health in the world. In addition, a secondary DENV infection sometimes causes dengue hemorrhagic fever (DHF), which frequently leads to death. For this reason, accurate diagnosis record management is useful for prediction of DHF. Therefore, the demand for DENV rapid diagnosis tests (RDTs) is increasing because these tests are easy and rapid to use. However, commercially available RDTs often show low sensitivity for DENV and cross-reactivity against other flaviviruses, especially Zika virus (ZIKV). METHODS: We developed two types of novel DENV non-structural protein 1 (NS1) detection RDTs, designated TKK-1st and TKK-2nd kits. Specificities of the monoclonal antibodies (MAbs) used in these kits were confirmed by enzyme-linked immuno-sorbent assay (ELISA), dot blot, and western blot using recombinant NS1 proteins and synthetic peptides. For evaluation of sensitivity, specificity, and cross-reactivity of the novel DENV NS1 RDTs, we first used cultured DENV and other flaviviruses, ZIKV and Japanese encephalitis virus (JEV). We then used clinical specimens obtained in Bangladesh in 2017 for further evaluation of kit sensitivity and specificity in comparison with commercially available RDTs. In addition, RNA extracted from sera were used for viral genome sequencing and genotyping. RESULTS: Epitopes of three out of four MAbs used in the two novel RDTs were located in amino acid positions 100 to 122 in the NS1 protein, a region that shows low levels of homology with other flaviviruses. Our new kits showed high levels of sensitivity against various serotypes and genotypes of DENV and exhibited high levels of specificity without cross-reactivity against ZIKV and JEV. In clinical specimens, our RDTs showed sensitivities of 96.0% (145/151, TKK-1st kit) and 96.7% (146/151, TKK-2nd kit), and specificities of 98.0% (98/100, TKK-1st kit and TKK-2nd kit). On the other hand, in the case of the commercially available SD Bioline RDT, sensitivity was 83.4% (126/151) and specificity was 99.0% (99/100) against the same clinical specimens. CONCLUSIONS: Our novel DENV NS1-targeting RDTs demonstrated high levels of sensitivity and lacked cross-reactivity against ZIKV and JEV compared with commercially available RDTs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12985-019-1204-y) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6694664
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-66946642019-08-19 Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017 Suzuki, Keita Nakayama, Emi E. Saito, Akatsuki Egawa, Akio Sato, Tairyu Phadungsombat, Juthamas Rahim, Rummana Hasan, Abu Iwamoto, Hisahiko Rahman, Mizanur Shioda, Tatsuo Virol J Research BACKGROUND: Dengue virus (DENV) infection is one of the biggest challenges for human health in the world. In addition, a secondary DENV infection sometimes causes dengue hemorrhagic fever (DHF), which frequently leads to death. For this reason, accurate diagnosis record management is useful for prediction of DHF. Therefore, the demand for DENV rapid diagnosis tests (RDTs) is increasing because these tests are easy and rapid to use. However, commercially available RDTs often show low sensitivity for DENV and cross-reactivity against other flaviviruses, especially Zika virus (ZIKV). METHODS: We developed two types of novel DENV non-structural protein 1 (NS1) detection RDTs, designated TKK-1st and TKK-2nd kits. Specificities of the monoclonal antibodies (MAbs) used in these kits were confirmed by enzyme-linked immuno-sorbent assay (ELISA), dot blot, and western blot using recombinant NS1 proteins and synthetic peptides. For evaluation of sensitivity, specificity, and cross-reactivity of the novel DENV NS1 RDTs, we first used cultured DENV and other flaviviruses, ZIKV and Japanese encephalitis virus (JEV). We then used clinical specimens obtained in Bangladesh in 2017 for further evaluation of kit sensitivity and specificity in comparison with commercially available RDTs. In addition, RNA extracted from sera were used for viral genome sequencing and genotyping. RESULTS: Epitopes of three out of four MAbs used in the two novel RDTs were located in amino acid positions 100 to 122 in the NS1 protein, a region that shows low levels of homology with other flaviviruses. Our new kits showed high levels of sensitivity against various serotypes and genotypes of DENV and exhibited high levels of specificity without cross-reactivity against ZIKV and JEV. In clinical specimens, our RDTs showed sensitivities of 96.0% (145/151, TKK-1st kit) and 96.7% (146/151, TKK-2nd kit), and specificities of 98.0% (98/100, TKK-1st kit and TKK-2nd kit). On the other hand, in the case of the commercially available SD Bioline RDT, sensitivity was 83.4% (126/151) and specificity was 99.0% (99/100) against the same clinical specimens. CONCLUSIONS: Our novel DENV NS1-targeting RDTs demonstrated high levels of sensitivity and lacked cross-reactivity against ZIKV and JEV compared with commercially available RDTs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12985-019-1204-y) contains supplementary material, which is available to authorized users. BioMed Central 2019-08-15 /pmc/articles/PMC6694664/ /pubmed/31416485 http://dx.doi.org/10.1186/s12985-019-1204-y Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Suzuki, Keita
Nakayama, Emi E.
Saito, Akatsuki
Egawa, Akio
Sato, Tairyu
Phadungsombat, Juthamas
Rahim, Rummana
Hasan, Abu
Iwamoto, Hisahiko
Rahman, Mizanur
Shioda, Tatsuo
Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title_full Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title_fullStr Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title_full_unstemmed Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title_short Evaluation of novel rapid detection kits for dengue virus NS1 antigen in Dhaka, Bangladesh, in 2017
title_sort evaluation of novel rapid detection kits for dengue virus ns1 antigen in dhaka, bangladesh, in 2017
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6694664/
https://www.ncbi.nlm.nih.gov/pubmed/31416485
http://dx.doi.org/10.1186/s12985-019-1204-y
work_keys_str_mv AT suzukikeita evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT nakayamaemie evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT saitoakatsuki evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT egawaakio evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT satotairyu evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT phadungsombatjuthamas evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT rahimrummana evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT hasanabu evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT iwamotohisahiko evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT rahmanmizanur evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017
AT shiodatatsuo evaluationofnovelrapiddetectionkitsfordenguevirusns1antigenindhakabangladeshin2017