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Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra
Complexes were formed pairing FX, FHY, FH(2)Z, and FH(3)T (X = Cl, Br, I; Y = S, Se, Te; Z = P, As, Sb; T = Si, Ge, Sn) with NH(3) in order to form an A⋯N noncovalent bond, where A refers to the central atom. Geometries, energetics, atomic charges, and spectroscopic characteristics of these complexe...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6696224/ https://www.ncbi.nlm.nih.gov/pubmed/31382402 http://dx.doi.org/10.3390/molecules24152822 |
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author | Lu, Jia Scheiner, Steve |
author_facet | Lu, Jia Scheiner, Steve |
author_sort | Lu, Jia |
collection | PubMed |
description | Complexes were formed pairing FX, FHY, FH(2)Z, and FH(3)T (X = Cl, Br, I; Y = S, Se, Te; Z = P, As, Sb; T = Si, Ge, Sn) with NH(3) in order to form an A⋯N noncovalent bond, where A refers to the central atom. Geometries, energetics, atomic charges, and spectroscopic characteristics of these complexes were evaluated via DFT calculations. In all cases, the A–F bond, which is located opposite the base and is responsible for the σ-hole on the A atom, elongates and its stretching frequency undergoes a shift to the red. This shift varies from 42 to 175 cm(−1) and is largest for the halogen bonds, followed by chalcogen, tetrel, and then pnicogen. The shift also decreases as the central A atom is enlarged. The NMR chemical shielding of the A atom is increased while that of the F and electron donor N atom are lowered. Unlike the IR frequency shifts, it is the third-row A atoms that undergo the largest change in NMR shielding. The change in shielding of A is highly variable, ranging from negligible for FSnH(3) all the way up to 1675 ppm for FBr, while those of the F atom lie in the 55–422 ppm range. Although smaller in magnitude, the changes in the N shielding are still easily detectable, between 7 and 27 ppm. |
format | Online Article Text |
id | pubmed-6696224 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-66962242019-09-05 Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra Lu, Jia Scheiner, Steve Molecules Article Complexes were formed pairing FX, FHY, FH(2)Z, and FH(3)T (X = Cl, Br, I; Y = S, Se, Te; Z = P, As, Sb; T = Si, Ge, Sn) with NH(3) in order to form an A⋯N noncovalent bond, where A refers to the central atom. Geometries, energetics, atomic charges, and spectroscopic characteristics of these complexes were evaluated via DFT calculations. In all cases, the A–F bond, which is located opposite the base and is responsible for the σ-hole on the A atom, elongates and its stretching frequency undergoes a shift to the red. This shift varies from 42 to 175 cm(−1) and is largest for the halogen bonds, followed by chalcogen, tetrel, and then pnicogen. The shift also decreases as the central A atom is enlarged. The NMR chemical shielding of the A atom is increased while that of the F and electron donor N atom are lowered. Unlike the IR frequency shifts, it is the third-row A atoms that undergo the largest change in NMR shielding. The change in shielding of A is highly variable, ranging from negligible for FSnH(3) all the way up to 1675 ppm for FBr, while those of the F atom lie in the 55–422 ppm range. Although smaller in magnitude, the changes in the N shielding are still easily detectable, between 7 and 27 ppm. MDPI 2019-08-02 /pmc/articles/PMC6696224/ /pubmed/31382402 http://dx.doi.org/10.3390/molecules24152822 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lu, Jia Scheiner, Steve Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title | Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title_full | Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title_fullStr | Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title_full_unstemmed | Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title_short | Effects of Halogen, Chalcogen, Pnicogen, and Tetrel Bonds on IR and NMR Spectra |
title_sort | effects of halogen, chalcogen, pnicogen, and tetrel bonds on ir and nmr spectra |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6696224/ https://www.ncbi.nlm.nih.gov/pubmed/31382402 http://dx.doi.org/10.3390/molecules24152822 |
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