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gndDb, a Database of Partial gnd Sequences To Assist with Analysis of Escherichia coli Communities Using High-Throughput Sequencing

The use of culture methods to detect Escherichia coli diversity does not provide sufficient resolution to identify strains present at low levels. Here, we target the hypervariable gnd gene and describe a database containing 534 distinct partial gnd sequences and associated O groups for use with cult...

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Detalles Bibliográficos
Autores principales:	Cookson, Adrian L., Lacher, David W., Scheutz, Flemming, Wilkinson, David A., Biggs, Patrick J., Marshall, Jonathan C., Brightwell, Gale
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2019
Materias:	Databases and Software
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6696633/ https://www.ncbi.nlm.nih.gov/pubmed/31416858 http://dx.doi.org/10.1128/MRA.00476-19

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