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Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)

Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. ill...

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Detalles Bibliográficos
Autores principales: Gao, Zhenghui, Deng, Wenhui, Zhu, Fen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697329/
https://www.ncbi.nlm.nih.gov/pubmed/31419256
http://dx.doi.org/10.1371/journal.pone.0221420
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author Gao, Zhenghui
Deng, Wenhui
Zhu, Fen
author_facet Gao, Zhenghui
Deng, Wenhui
Zhu, Fen
author_sort Gao, Zhenghui
collection PubMed
description Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. illucens reference genes has not yet been carried out. To find suitable reference genes for normalizing gene expression data, the stability of eight housekeeping genes (including ATP6V1A, RPL8, EF1, Tubulin, TBP, GAPDH, Actin and RP49) was investigated under both biotic (developmental stages, tissues and sex) and abiotic (heavy metals, food, antibiotics) conditions. Gene expression data were analysed by geNorm, NormFinder, BestKeeper, and ΔCt programs. A set of specific reference genes was recommended for each experimental condition using the results of RefFinder synthesis analysis. This study offers a solid foundation for further studies of the molecular biology of H. illucens.
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spelling pubmed-66973292019-08-30 Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) Gao, Zhenghui Deng, Wenhui Zhu, Fen PLoS One Research Article Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. illucens reference genes has not yet been carried out. To find suitable reference genes for normalizing gene expression data, the stability of eight housekeeping genes (including ATP6V1A, RPL8, EF1, Tubulin, TBP, GAPDH, Actin and RP49) was investigated under both biotic (developmental stages, tissues and sex) and abiotic (heavy metals, food, antibiotics) conditions. Gene expression data were analysed by geNorm, NormFinder, BestKeeper, and ΔCt programs. A set of specific reference genes was recommended for each experimental condition using the results of RefFinder synthesis analysis. This study offers a solid foundation for further studies of the molecular biology of H. illucens. Public Library of Science 2019-08-16 /pmc/articles/PMC6697329/ /pubmed/31419256 http://dx.doi.org/10.1371/journal.pone.0221420 Text en © 2019 Gao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Gao, Zhenghui
Deng, Wenhui
Zhu, Fen
Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title_full Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title_fullStr Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title_full_unstemmed Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title_short Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
title_sort reference gene selection for quantitative gene expression analysis in black soldier fly (hermetia illucens)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697329/
https://www.ncbi.nlm.nih.gov/pubmed/31419256
http://dx.doi.org/10.1371/journal.pone.0221420
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