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Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens)
Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. ill...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697329/ https://www.ncbi.nlm.nih.gov/pubmed/31419256 http://dx.doi.org/10.1371/journal.pone.0221420 |
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author | Gao, Zhenghui Deng, Wenhui Zhu, Fen |
author_facet | Gao, Zhenghui Deng, Wenhui Zhu, Fen |
author_sort | Gao, Zhenghui |
collection | PubMed |
description | Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. illucens reference genes has not yet been carried out. To find suitable reference genes for normalizing gene expression data, the stability of eight housekeeping genes (including ATP6V1A, RPL8, EF1, Tubulin, TBP, GAPDH, Actin and RP49) was investigated under both biotic (developmental stages, tissues and sex) and abiotic (heavy metals, food, antibiotics) conditions. Gene expression data were analysed by geNorm, NormFinder, BestKeeper, and ΔCt programs. A set of specific reference genes was recommended for each experimental condition using the results of RefFinder synthesis analysis. This study offers a solid foundation for further studies of the molecular biology of H. illucens. |
format | Online Article Text |
id | pubmed-6697329 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-66973292019-08-30 Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) Gao, Zhenghui Deng, Wenhui Zhu, Fen PLoS One Research Article Hermetia illucens is an important resource insect for the conversion of organic waste. Quantitative PCR (qPCR) is the primary tool of gene expression analysis and a core technology of molecular biology research. Reference genes are essential for qPCR analysis; however, a stability analysis of H. illucens reference genes has not yet been carried out. To find suitable reference genes for normalizing gene expression data, the stability of eight housekeeping genes (including ATP6V1A, RPL8, EF1, Tubulin, TBP, GAPDH, Actin and RP49) was investigated under both biotic (developmental stages, tissues and sex) and abiotic (heavy metals, food, antibiotics) conditions. Gene expression data were analysed by geNorm, NormFinder, BestKeeper, and ΔCt programs. A set of specific reference genes was recommended for each experimental condition using the results of RefFinder synthesis analysis. This study offers a solid foundation for further studies of the molecular biology of H. illucens. Public Library of Science 2019-08-16 /pmc/articles/PMC6697329/ /pubmed/31419256 http://dx.doi.org/10.1371/journal.pone.0221420 Text en © 2019 Gao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Gao, Zhenghui Deng, Wenhui Zhu, Fen Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title | Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title_full | Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title_fullStr | Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title_full_unstemmed | Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title_short | Reference gene selection for quantitative gene expression analysis in black soldier fly (Hermetia illucens) |
title_sort | reference gene selection for quantitative gene expression analysis in black soldier fly (hermetia illucens) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697329/ https://www.ncbi.nlm.nih.gov/pubmed/31419256 http://dx.doi.org/10.1371/journal.pone.0221420 |
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