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Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador
Arbuscular mycorrhizal fungi (AMF) are the most prominent mycobionts of plants in the tropics, yet little is known about their diversity, species compositions and factors driving AMF distribution patterns. To investigate whether elevation and associated vegetation type affect species composition, we...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697372/ https://www.ncbi.nlm.nih.gov/pubmed/31419262 http://dx.doi.org/10.1371/journal.pone.0221091 |
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author | Haug, Ingeborg Setaro, Sabrina Suárez, Juan Pablo |
author_facet | Haug, Ingeborg Setaro, Sabrina Suárez, Juan Pablo |
author_sort | Haug, Ingeborg |
collection | PubMed |
description | Arbuscular mycorrhizal fungi (AMF) are the most prominent mycobionts of plants in the tropics, yet little is known about their diversity, species compositions and factors driving AMF distribution patterns. To investigate whether elevation and associated vegetation type affect species composition, we sampled 646 mycorrhizal samples in locations between 1000 and 4000 m above sea level (masl) in the South of Ecuador. We estimated diversity, distribution and species compositions of AMF by cloning and Sanger sequencing the 18S rDNA (the section between AML1 and AML2) and subsequent derivation of fungal OTUs based on 99% sequence similarity. In addition, we analyzed the phylogenetic structure of the sites by computing the mean pairwise distance (MPD) and the mean nearest taxon difference (MNTD) for each elevation level. It revealed that AMF species compositions at 1000 and 2000 masl differ from 3000 and 4000 masl. Lower elevations (1000 and 2000 masl) were dominated by members of Glomeraceae, whereas Acaulosporaceae were more abundant in higher elevations (3000 and 4000 masl). Ordination of OTUs with respect to study sites revealed a correlation to elevation with a continuous turnover of species from lower to higher elevations. Most of the abundant OTUs are not endemic to South Ecuador. We also found a high proportion of rare OTUs at all elevations: 79–85% of OTUs occurred in less than 5% of the samples. Phylogenetic community analysis indicated clustering and evenness for most elevation levels indicating that both, stochastic processes and habitat filtering are driving factors of AMF community compositions. |
format | Online Article Text |
id | pubmed-6697372 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-66973722019-08-30 Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador Haug, Ingeborg Setaro, Sabrina Suárez, Juan Pablo PLoS One Research Article Arbuscular mycorrhizal fungi (AMF) are the most prominent mycobionts of plants in the tropics, yet little is known about their diversity, species compositions and factors driving AMF distribution patterns. To investigate whether elevation and associated vegetation type affect species composition, we sampled 646 mycorrhizal samples in locations between 1000 and 4000 m above sea level (masl) in the South of Ecuador. We estimated diversity, distribution and species compositions of AMF by cloning and Sanger sequencing the 18S rDNA (the section between AML1 and AML2) and subsequent derivation of fungal OTUs based on 99% sequence similarity. In addition, we analyzed the phylogenetic structure of the sites by computing the mean pairwise distance (MPD) and the mean nearest taxon difference (MNTD) for each elevation level. It revealed that AMF species compositions at 1000 and 2000 masl differ from 3000 and 4000 masl. Lower elevations (1000 and 2000 masl) were dominated by members of Glomeraceae, whereas Acaulosporaceae were more abundant in higher elevations (3000 and 4000 masl). Ordination of OTUs with respect to study sites revealed a correlation to elevation with a continuous turnover of species from lower to higher elevations. Most of the abundant OTUs are not endemic to South Ecuador. We also found a high proportion of rare OTUs at all elevations: 79–85% of OTUs occurred in less than 5% of the samples. Phylogenetic community analysis indicated clustering and evenness for most elevation levels indicating that both, stochastic processes and habitat filtering are driving factors of AMF community compositions. Public Library of Science 2019-08-16 /pmc/articles/PMC6697372/ /pubmed/31419262 http://dx.doi.org/10.1371/journal.pone.0221091 Text en © 2019 Haug et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Haug, Ingeborg Setaro, Sabrina Suárez, Juan Pablo Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title | Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title_full | Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title_fullStr | Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title_full_unstemmed | Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title_short | Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador |
title_sort | species composition of arbuscular mycorrhizal communities changes with elevation in the andes of south ecuador |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697372/ https://www.ncbi.nlm.nih.gov/pubmed/31419262 http://dx.doi.org/10.1371/journal.pone.0221091 |
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