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A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging

OBJECTIVES: The purpose of this study was to segment the left ventricle (LV) blood pool, LV myocardium, and right ventricle (RV) blood pool of end-diastole and end-systole frames in free-breathing cardiac magnetic resonance (CMR) imaging. Automatic and accurate segmentation of cardiac structures cou...

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Autores principales: Yang, Fan, Zhang, Yan, Lei, Pinggui, Wang, Lihui, Miao, Yuehong, Xie, Hong, Zeng, Zhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699314/
https://www.ncbi.nlm.nih.gov/pubmed/31467898
http://dx.doi.org/10.1155/2019/5636423
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author Yang, Fan
Zhang, Yan
Lei, Pinggui
Wang, Lihui
Miao, Yuehong
Xie, Hong
Zeng, Zhu
author_facet Yang, Fan
Zhang, Yan
Lei, Pinggui
Wang, Lihui
Miao, Yuehong
Xie, Hong
Zeng, Zhu
author_sort Yang, Fan
collection PubMed
description OBJECTIVES: The purpose of this study was to segment the left ventricle (LV) blood pool, LV myocardium, and right ventricle (RV) blood pool of end-diastole and end-systole frames in free-breathing cardiac magnetic resonance (CMR) imaging. Automatic and accurate segmentation of cardiac structures could reduce the postprocessing time of cardiac function analysis. METHOD: We proposed a novel deep learning network using a residual block for the segmentation of the heart and a random data augmentation strategy to reduce the training time and the problem of overfitting. Automated cardiac diagnosis challenge (ACDC) data were used for training, and the free-breathing CMR data were used for validation and testing. RESULTS: The average Dice was 0.919 (LV), 0.806 (myocardium), and 0.818 (RV). The average IoU was 0.860 (LV), 0.699 (myocardium), and 0.761 (RV). CONCLUSIONS: The proposed method may aid in the segmentation of cardiac images and improves the postprocessing efficiency of cardiac function analysis.
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spelling pubmed-66993142019-08-29 A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging Yang, Fan Zhang, Yan Lei, Pinggui Wang, Lihui Miao, Yuehong Xie, Hong Zeng, Zhu Biomed Res Int Research Article OBJECTIVES: The purpose of this study was to segment the left ventricle (LV) blood pool, LV myocardium, and right ventricle (RV) blood pool of end-diastole and end-systole frames in free-breathing cardiac magnetic resonance (CMR) imaging. Automatic and accurate segmentation of cardiac structures could reduce the postprocessing time of cardiac function analysis. METHOD: We proposed a novel deep learning network using a residual block for the segmentation of the heart and a random data augmentation strategy to reduce the training time and the problem of overfitting. Automated cardiac diagnosis challenge (ACDC) data were used for training, and the free-breathing CMR data were used for validation and testing. RESULTS: The average Dice was 0.919 (LV), 0.806 (myocardium), and 0.818 (RV). The average IoU was 0.860 (LV), 0.699 (myocardium), and 0.761 (RV). CONCLUSIONS: The proposed method may aid in the segmentation of cardiac images and improves the postprocessing efficiency of cardiac function analysis. Hindawi 2019-07-30 /pmc/articles/PMC6699314/ /pubmed/31467898 http://dx.doi.org/10.1155/2019/5636423 Text en Copyright © 2019 Fan Yang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yang, Fan
Zhang, Yan
Lei, Pinggui
Wang, Lihui
Miao, Yuehong
Xie, Hong
Zeng, Zhu
A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title_full A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title_fullStr A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title_full_unstemmed A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title_short A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging
title_sort deep learning segmentation approach in free-breathing real-time cardiac magnetic resonance imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699314/
https://www.ncbi.nlm.nih.gov/pubmed/31467898
http://dx.doi.org/10.1155/2019/5636423
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