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Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest

The internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest...

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Autores principales: Qian, Liu, Daren, Li, Qingliang, Niu, Danfeng, Huang, Liying, Chang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699708/
https://www.ncbi.nlm.nih.gov/pubmed/31425533
http://dx.doi.org/10.1371/journal.pone.0221259
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author Qian, Liu
Daren, Li
Qingliang, Niu
Danfeng, Huang
Liying, Chang
author_facet Qian, Liu
Daren, Li
Qingliang, Niu
Danfeng, Huang
Liying, Chang
author_sort Qian, Liu
collection PubMed
description The internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest to us were measured. Pearson analysis showed that most external phenotypic traits were highly correlated with these internal phenotypes in muskmelon fruit. In this study, we used the random forest algorithm to predict muskmelon fruit internal phenotypes based on the significantly associated external parameters. Carotenoids, sucrose, and total soluble solid (TSS) were the three most accurately monitored internal phenotypes with prediction R-squared (R(2)) values of 0.947 (root-mean-square error (RMSE) = 0.019 mg/100 g), 0.918 (RMSE = 3.233 mg/g), and 0.916 (RMSE = 1.089%), respectively. Further, a simplified model was constructed and validated based on the top 10 external phenotypic parameters associated with each internal phenotype, and these parameters were filtered with the varImp function from the random forest package. The top 10 external phenotypic parameters correlated with each internal phenotype used in the simplified model were not identical. The results showed that the simplified models also accurately monitored the melon internal phenotypes, despite that the predicted R(2) values decreased 0.3% to 7.9% compared with the original models. This study improved the efficiency and accuracy of real-time fruit quality monitoring for greenhouse muskmelon.
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spelling pubmed-66997082019-09-04 Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest Qian, Liu Daren, Li Qingliang, Niu Danfeng, Huang Liying, Chang PLoS One Research Article The internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest to us were measured. Pearson analysis showed that most external phenotypic traits were highly correlated with these internal phenotypes in muskmelon fruit. In this study, we used the random forest algorithm to predict muskmelon fruit internal phenotypes based on the significantly associated external parameters. Carotenoids, sucrose, and total soluble solid (TSS) were the three most accurately monitored internal phenotypes with prediction R-squared (R(2)) values of 0.947 (root-mean-square error (RMSE) = 0.019 mg/100 g), 0.918 (RMSE = 3.233 mg/g), and 0.916 (RMSE = 1.089%), respectively. Further, a simplified model was constructed and validated based on the top 10 external phenotypic parameters associated with each internal phenotype, and these parameters were filtered with the varImp function from the random forest package. The top 10 external phenotypic parameters correlated with each internal phenotype used in the simplified model were not identical. The results showed that the simplified models also accurately monitored the melon internal phenotypes, despite that the predicted R(2) values decreased 0.3% to 7.9% compared with the original models. This study improved the efficiency and accuracy of real-time fruit quality monitoring for greenhouse muskmelon. Public Library of Science 2019-08-19 /pmc/articles/PMC6699708/ /pubmed/31425533 http://dx.doi.org/10.1371/journal.pone.0221259 Text en © 2019 Qian et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Qian, Liu
Daren, Li
Qingliang, Niu
Danfeng, Huang
Liying, Chang
Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title_full Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title_fullStr Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title_full_unstemmed Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title_short Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest
title_sort non-destructive monitoring of netted muskmelon quality based on its external phenotype using random forest
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6699708/
https://www.ncbi.nlm.nih.gov/pubmed/31425533
http://dx.doi.org/10.1371/journal.pone.0221259
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