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Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay

During translation, an mRNA is typically occupied by multiple ribosomes sparsely distributed across the coding sequence. This distribution, mediated by slow rates of initiation relative to elongation, ensures that they rarely collide with each other, but given the stochastic nature of protein synthe...

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Detalles Bibliográficos
Autores principales: Simms, Carrie L., Yan, Liewei L., Qiu, Jessica K., Zaher, Hani S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6701860/
https://www.ncbi.nlm.nih.gov/pubmed/31412239
http://dx.doi.org/10.1016/j.celrep.2019.07.046
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author Simms, Carrie L.
Yan, Liewei L.
Qiu, Jessica K.
Zaher, Hani S.
author_facet Simms, Carrie L.
Yan, Liewei L.
Qiu, Jessica K.
Zaher, Hani S.
author_sort Simms, Carrie L.
collection PubMed
description During translation, an mRNA is typically occupied by multiple ribosomes sparsely distributed across the coding sequence. This distribution, mediated by slow rates of initiation relative to elongation, ensures that they rarely collide with each other, but given the stochastic nature of protein synthesis, collision events do occur. Recent work from our lab suggested that collisions signal for mRNA degradation through no-go decay (NGD). We have explored the impact of stalling on ribosome function when NGD is compromised and found it to result in +1 frameshifting. We used reporters that limit the number of ribosomes on a transcript to show that +1 frameshifting is induced through ribosome collision in yeast and bacteria. Furthermore, we observe a positive correlation between ribosome density and frameshifting efficiency. It is thus tempting to speculate that NGD, in addition to its role in mRNA quality control, evolved to cope with stochastic collision events to prevent deleterious frameshifting events.
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spelling pubmed-67018602019-08-20 Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay Simms, Carrie L. Yan, Liewei L. Qiu, Jessica K. Zaher, Hani S. Cell Rep Article During translation, an mRNA is typically occupied by multiple ribosomes sparsely distributed across the coding sequence. This distribution, mediated by slow rates of initiation relative to elongation, ensures that they rarely collide with each other, but given the stochastic nature of protein synthesis, collision events do occur. Recent work from our lab suggested that collisions signal for mRNA degradation through no-go decay (NGD). We have explored the impact of stalling on ribosome function when NGD is compromised and found it to result in +1 frameshifting. We used reporters that limit the number of ribosomes on a transcript to show that +1 frameshifting is induced through ribosome collision in yeast and bacteria. Furthermore, we observe a positive correlation between ribosome density and frameshifting efficiency. It is thus tempting to speculate that NGD, in addition to its role in mRNA quality control, evolved to cope with stochastic collision events to prevent deleterious frameshifting events. 2019-08-13 /pmc/articles/PMC6701860/ /pubmed/31412239 http://dx.doi.org/10.1016/j.celrep.2019.07.046 Text en This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Simms, Carrie L.
Yan, Liewei L.
Qiu, Jessica K.
Zaher, Hani S.
Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title_full Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title_fullStr Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title_full_unstemmed Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title_short Ribosome Collisions Result in +1 Frameshifting in the Absence of No-Go Decay
title_sort ribosome collisions result in +1 frameshifting in the absence of no-go decay
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6701860/
https://www.ncbi.nlm.nih.gov/pubmed/31412239
http://dx.doi.org/10.1016/j.celrep.2019.07.046
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