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A hierarchy of environmental covariates control the global biogeography of soil bacterial richness

Soil bacterial communities are central to ecosystem functioning and services, yet spatial variations in their composition and diversity across biomes and climatic regions remain largely unknown. We employ multivariate general additive modeling of recent global soil bacterial datasets to elucidate de...

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Detalles Bibliográficos
Autores principales: Bickel, Samuel, Chen, Xi, Papritz, Andreas, Or, Dani
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6702155/
https://www.ncbi.nlm.nih.gov/pubmed/31431661
http://dx.doi.org/10.1038/s41598-019-48571-w
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author Bickel, Samuel
Chen, Xi
Papritz, Andreas
Or, Dani
author_facet Bickel, Samuel
Chen, Xi
Papritz, Andreas
Or, Dani
author_sort Bickel, Samuel
collection PubMed
description Soil bacterial communities are central to ecosystem functioning and services, yet spatial variations in their composition and diversity across biomes and climatic regions remain largely unknown. We employ multivariate general additive modeling of recent global soil bacterial datasets to elucidate dependencies of bacterial richness on key soil and climatic attributes. Although results support the well-known association between bacterial richness and soil pH, a hierarchy of novel covariates offers surprising new insights. Defining climatic soil water content explains both, the extent and connectivity of aqueous micro-habitats for bacterial diversity and soil pH, thus providing a better causal attribution. Results show that globally rare and abundant soil bacterial phylotypes exhibit different levels of dependency on environmental attributes. Surprisingly, the strong sensitivity of rare bacteria to certain environmental conditions improves their predictability relative to more abundant phylotypes that are often indifferent to variations in environmental drivers.
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spelling pubmed-67021552019-08-23 A hierarchy of environmental covariates control the global biogeography of soil bacterial richness Bickel, Samuel Chen, Xi Papritz, Andreas Or, Dani Sci Rep Article Soil bacterial communities are central to ecosystem functioning and services, yet spatial variations in their composition and diversity across biomes and climatic regions remain largely unknown. We employ multivariate general additive modeling of recent global soil bacterial datasets to elucidate dependencies of bacterial richness on key soil and climatic attributes. Although results support the well-known association between bacterial richness and soil pH, a hierarchy of novel covariates offers surprising new insights. Defining climatic soil water content explains both, the extent and connectivity of aqueous micro-habitats for bacterial diversity and soil pH, thus providing a better causal attribution. Results show that globally rare and abundant soil bacterial phylotypes exhibit different levels of dependency on environmental attributes. Surprisingly, the strong sensitivity of rare bacteria to certain environmental conditions improves their predictability relative to more abundant phylotypes that are often indifferent to variations in environmental drivers. Nature Publishing Group UK 2019-08-20 /pmc/articles/PMC6702155/ /pubmed/31431661 http://dx.doi.org/10.1038/s41598-019-48571-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Bickel, Samuel
Chen, Xi
Papritz, Andreas
Or, Dani
A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title_full A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title_fullStr A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title_full_unstemmed A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title_short A hierarchy of environmental covariates control the global biogeography of soil bacterial richness
title_sort hierarchy of environmental covariates control the global biogeography of soil bacterial richness
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6702155/
https://www.ncbi.nlm.nih.gov/pubmed/31431661
http://dx.doi.org/10.1038/s41598-019-48571-w
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